RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 TP53I11O14683 189 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 TNFRSF13BO14836 293 aaPredicted RBP5.87□□□□□ -1.47
NEDD8-203ENST00000524927 OGG1O15527 345 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 HSPA12AO43301 675 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 SPRY3O43610 288 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 CDH16O75309 829 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 REM1O75628 298 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 LCATP04180 440 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 TUBBP07437 444 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 ALOX5P09917 674 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 NR2F1P10589 423 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 RNH1P13489 461 aaKnown RBP5.87□□□□□ -1.47
NEDD8-203ENST00000524927 DAOP14920 347 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 ANPEPP15144 967 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 TNNT3P45378 269 aaPredicted RBP5.87□□□□□ -1.47
NEDD8-203ENST00000524927 HSD17B7P56937 341 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 SNRPD2P62316 118 aaKnown RBP5.87□□□□□ -1.47
NEDD8-203ENST00000524927 MRPS34P82930 218 aaKnown RBP5.87□□□□□ -1.47
NEDD8-203ENST00000524927 CDR2Q01850 454 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 ZBTB17Q13105 803 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 KRT81Q14533 505 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 HNF4GQ14541 408 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 PAFAH1B3Q15102 231 aaKnown RBP5.87□□□□□ -1.47
NEDD8-203ENST00000524927 EXOC3L4Q17RC7 722 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 DEFB134Q4QY38 66 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 FASTKD1Q53R41 847 aaKnown RBP5.87□□□□□ -1.47
NEDD8-203ENST00000524927 BOLA3Q53S33 107 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 CCDC183Q5T5S1 534 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 B3GLCTQ6Y288 498 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 CENPQQ7L2Z9 268 aaPredicted RBP5.87□□□□□ -1.47
NEDD8-203ENST00000524927 ADCK2Q7Z695 626 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 ZC3HC1Q86WB0 502 aaKnown RBP5.87□□□□□ -1.47
NEDD8-203ENST00000524927 SERPINA9Q86WD7 417 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 TC2NQ8N9U0 490 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 OR14A16Q8NHC5 309 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 SPATA22Q8NHS9 363 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 PANX2Q96RD6 677 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 INPP5KQ9BT40 448 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 DENND2DQ9H6A0 471 aaPredicted RBP5.87□□□□□ -1.47
NEDD8-203ENST00000524927 C1RLQ9NZP8 487 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 ARL5AQ9Y689 179 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 WNK2Q9Y3S1 2297 aa5.87□□□□□ -1.47
NEDD8-203ENST00000524927 C5orf60A6NFR6 353 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 SS18L1O75177 396 aaPredicted RBP5.86□□□□□ -1.47
NEDD8-203ENST00000524927 GCM2O75603 506 aaPredicted RBP5.86□□□□□ -1.47
NEDD8-203ENST00000524927 C1orf105O95561 183 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 SLC35G6P0C7Q6 338 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 ERGP11308 486 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 PTAFRP25105 342 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 HNRNPH1P31943 449 aaKnown RBP5.86□□□□□ -1.47
NEDD8-203ENST00000524927 STX2P32856 288 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 CTBP2P56545 445 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 ROR2Q01974 943 aaKnown RBP5.86□□□□□ -1.47
NEDD8-203ENST00000524927 RASGEF1BQ0VAM2 473 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 HSPA14Q0VDF9 509 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 PCLAFQ15004 111 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 PPA1Q15181 289 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 TAF1AQ15573 450 aaPredicted RBP5.86□□□□□ -1.47
NEDD8-203ENST00000524927 PNLIPRP3Q17RR3 467 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 CCSMST1Q4G0I0 132 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 SLC30A6Q6NXT4 461 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 TRIM40Q6P9F5 258 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 PACS1Q6VY07 963 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 ADAMTSL5Q6ZMM2 481 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 SDCCAG8Q86SQ7 713 aaPredicted RBP5.86□□□□□ -1.47
NEDD8-203ENST00000524927 ASPGQ86U10 573 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 LINC00346Q8IVM7 164 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 GABRG1Q8N1C3 465 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 CCNYQ8ND76 341 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 OR1J4Q8NGS1 313 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 CLDND2Q8NHS1 167 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 FNDC9Q8TBE3 224 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 PTPMT1Q8WUK0 201 aaPredicted RBP5.86□□□□□ -1.47
NEDD8-203ENST00000524927 SLC13A3Q8WWT9 602 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 GMPPAQ96IJ6 420 aaPredicted RBP5.86□□□□□ -1.47
NEDD8-203ENST00000524927 TXNDC15Q96J42 360 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 ZNF48Q96MX3 618 aaPredicted RBP5.86□□□□□ -1.47
NEDD8-203ENST00000524927 OR8D2Q9GZM6 311 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 RAB1BQ9H0U4 201 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 SIX2Q9NPC8 291 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 CPSF2Q9P2I0 782 aaKnown RBP5.86□□□□□ -1.47
NEDD8-203ENST00000524927 COPS7AQ9UBW8 275 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 OR14J1Q9UGF5 321 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 TAC3Q9UHF0 121 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 PRSS21Q9Y6M0 314 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 MUC4Q99102 2169 aa5.86□□□□□ -1.47
NEDD8-203ENST00000524927 WI2-2373I1.2A0A1W2PRP0 233 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 WNT9BO14905 357 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 RGS14O43566 566 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 ZNF500O60304 480 aaPredicted RBP5.85□□□□□ -1.47
NEDD8-203ENST00000524927 MITFO75030 526 aaPredicted RBP5.85□□□□□ -1.47
NEDD8-203ENST00000524927 CBR3O75828 277 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 APOA4P06727 396 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 SFTPBP07988 381 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 OR56A5P0C7T3 313 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 HRH2P25021 359 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 CASP3P42574 277 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 RFX2P48378 723 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 RFX3P48380 749 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 CSE1LP55060 971 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms