RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MMACHCQ9Y4U1 282 aa1.28□□□□□ -2.2
CD44-212ENST00000524922 TRGV5A0A0B4J1U4 118 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 C1orf232A0A0U1RR37 186 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 LOC285095A0A1B0GVY8 99 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 LOC390937A0A1W2PQ73 354 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 GOLGA6L4A6NEF3 574 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 SIGLEC16A6NMB1 481 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 H3BQV1 296 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 BTN3A3O00478 584 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 PES1O00541 588 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 UBFD1O14562 309 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 PSMA7O14818 248 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 SCAMP2O15127 329 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 PIN1P1O15428 100 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 POP7O75817 140 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 TNFSF13O75888 250 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 NDUFA7O95182 113 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 FGFR1OPO95684 399 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 STATHP02808 62 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 HEXBP07686 556 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 ANXA5P08758 320 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 SPARCP09486 303 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 UGT2B7P16662 529 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 GABRB1P18505 474 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 CDH2P19022 906 aaPredicted RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 CNR1P21554 472 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 USF1P22415 310 aaPredicted RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 UGT2B10P36537 528 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 RGRP47804 291 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 LMAN1P49257 510 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 TMED10P49755 219 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 RGS7P49802 495 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 SSR4P51571 173 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 CCR9P51686 369 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 EFNA4P52798 201 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 PAX9P55771 341 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 HSD17B7P56937 341 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 SLC26A5P58743 744 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 TPI1P60174 286 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 PPP1CAP62136 330 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 RPP38P78345 283 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 CX3CL1P78423 397 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 FUT7Q11130 342 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 VEZF1Q14119 521 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 RCAN2Q14206 197 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 RCN2Q14257 317 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 GANABQ14697 944 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 SLC10A1Q14973 349 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 PAFAH1B3Q15102 231 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 NSDHLQ15738 373 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 ZIC1Q15915 447 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 CA9Q16790 459 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 MOGAT2Q3SYC2 334 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 CCDC14Q49A88 953 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 TCHHL1Q5QJ38 904 aaPredicted RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 FAM120AOSQ5T036 256 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 GKAP1Q5VSY0 366 aaPredicted RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 AGAP6Q5VW22 663 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 RESP18Q5W5W9 173 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 RWDD4Q6NW29 188 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 CASC4Q6P4E1 433 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 OPN5Q6U736 354 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 TMCO3Q6UWJ1 677 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 CERS6Q6ZMG9 384 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 RTL4Q6ZR62 310 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 BZW1Q7L1Q6 419 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 FAM131BQ86XD5 332 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 CRLF3Q8IUI8 442 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 TRAPPC5Q8IUR0 188 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 CCDC71Q8IV32 467 aaPredicted RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 SLC22A15Q8IZD6 547 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 CYP4Z2PQ8N1L4 340 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 ATPAF2Q8N5M1 289 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 TMEM86BQ8N661 226 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 NIPA2Q8N8Q9 360 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 AQP11Q8NBQ7 271 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 APCDD1LQ8NCL9 501 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 B3GNT7Q8NFL0 401 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 OR2M7Q8NG81 312 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 OR5L2Q8NGL0 311 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 FBXO30Q8TB52 745 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 UBA3Q8TBC4 463 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 C10orf105Q8TEF2 133 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 SMAP2Q8WU79 429 aaPredicted RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 TFGQ92734 400 aaPredicted RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 IMP4Q96G21 291 aaKnown RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 VMP1Q96GC9 406 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 DHTKD1Q96HY7 919 aaPredicted RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 ELMO2Q96JJ3 720 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 RMDN2Q96LZ7 410 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 C12orf66Q96MD2 445 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 TIGD1Q96MW7 591 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 FAM218AQ96MZ4 157 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 ZNF317Q96PQ6 595 aaPredicted RBP1.27□□□□□ -2.21
CD44-212ENST00000524922 OR2A5Q96R48 311 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 CYTH2Q99418 400 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 NPAS2Q99743 824 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 TSG101Q99816 390 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 CITED1Q99966 193 aa1.27□□□□□ -2.21
CD44-212ENST00000524922 SELENOSQ9BQE4 189 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms