RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 CACNG6Q9BXT2 260 aa10.41□□□□□ -0.74
SPARC-206ENST00000524277 NUF2Q9BZD4 464 aa10.41□□□□□ -0.74
SPARC-206ENST00000524277 ADAM19Q9H013 955 aa10.41□□□□□ -0.74
SPARC-206ENST00000524277 SLC38A1Q9H2H9 487 aa10.41□□□□□ -0.74
SPARC-206ENST00000524277 MOV10Q9HCE1 1003 aaKnown RBP10.41□□□□□ -0.74
SPARC-206ENST00000524277 OBP2BQ9NPH6 170 aa10.41□□□□□ -0.74
SPARC-206ENST00000524277 YAE1D1Q9NRH1 226 aa10.41□□□□□ -0.74
SPARC-206ENST00000524277 TMEM160Q9NX00 188 aa10.41□□□□□ -0.74
SPARC-206ENST00000524277 THUMPD1Q9NXG2 353 aaKnown RBP10.41□□□□□ -0.74
SPARC-206ENST00000524277 GDF2Q9UK05 429 aaPredicted RBP10.41□□□□□ -0.74
SPARC-206ENST00000524277 FLVCR1Q9Y5Y0 555 aa10.41□□□□□ -0.74
SPARC-206ENST00000524277 ANK3Q12955 4377 aaKnown RBP10.41□□□□□ -0.74
SPARC-206ENST00000524277 FBN3Q75N90 2809 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 STAB1Q9NY15 2570 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 A0A096LPI6 279 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 PRAMEF27A3QJZ7 478 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 TRPC5OSA6NMA1 111 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 SLCO1B7G3V0H7 640 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 M0R1B8 84 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 VAMP5O95183 116 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 IGHV3-9P01782 118 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 ITGA5P08648 1049 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 NR2F1P10589 423 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 RPS4Y1P22090 263 aaKnown RBP10.4□□□□□ -0.74
SPARC-206ENST00000524277 CXCR1P25024 350 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 TACR3P29371 465 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 PRPS1P60891 318 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 COPZ1P61923 177 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 LOXL1Q08397 574 aaPredicted RBP10.4□□□□□ -0.74
SPARC-206ENST00000524277 EPS8Q12929 822 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 SYPL1Q16563 259 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 CHRFAM7AQ494W8 412 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 HMBOX1Q6NT76 420 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 KLHL24Q6TFL4 600 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 ZNF621Q6ZSS3 439 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 OLIG3Q7RTU3 272 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 RNF130Q86XS8 419 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 CNOT9Q92600 299 aaKnown RBP10.4□□□□□ -0.74
SPARC-206ENST00000524277 ZNF317Q96PQ6 595 aaPredicted RBP10.4□□□□□ -0.74
SPARC-206ENST00000524277 OR52E6Q96RD3 313 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 TNFRSF13CQ96RJ3 184 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 OR11A1Q9GZK7 315 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 C20orf27Q9GZN8 174 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 ARMC7Q9H6L4 198 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 SLC17A5Q9NRA2 495 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 AIG1Q9NVV5 245 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 FBXO9Q9UK97 447 aaPredicted RBP10.4□□□□□ -0.74
SPARC-206ENST00000524277 ALPK2Q86TB3 2170 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 MXRA5Q9NR99 2828 aa10.4□□□□□ -0.74
SPARC-206ENST00000524277 FBN1P35555 2871 aaKnown RBP10.39□□□□□ -0.75
SPARC-206ENST00000524277 TMEM72A0PK05 275 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 TMEM247A6NEH6 219 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 NDUFS7O75251 213 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 BCAS1O75363 584 aaPredicted RBP10.39□□□□□ -0.75
SPARC-206ENST00000524277 IL6P05231 212 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 IMPDH2P12268 514 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 CCNA2P20248 432 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 NTF4P34130 210 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 EFNA4P52798 201 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 UFM1P61960 85 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 IRX1P78414 480 aaPredicted RBP10.39□□□□□ -0.75
SPARC-206ENST00000524277 LIN52Q52LA3 116 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 WBP2NLQ6ICG8 309 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 ANKFN1Q8N957 763 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 WDR31Q8NA23 367 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 OR52E4Q8NGH9 312 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 FAM168AQ92567 244 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 TAPBPLQ9BX59 468 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 CACYBPQ9HB71 228 aaKnown RBP10.39□□□□□ -0.75
SPARC-206ENST00000524277 KCNK9Q9NPC2 374 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 THAP1Q9NVV9 213 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 P2RX2Q9UBL9 471 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 CDC42EP3Q9UKI2 254 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 ZNF232Q9UNY5 417 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 ATP23Q9Y6H3 246 aa10.39□□□□□ -0.75
SPARC-206ENST00000524277 IGHV4-30-2A0A087WSY4 118 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 LIPT2A6NK58 231 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 AQP7P3A6NL99 342 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 CLDN24A6NM45 220 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 A8MVM7 634 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 RFXANKO14593 260 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 AP3D1O14617 1153 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 HDAC3O15379 428 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 CHRM4P08173 479 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 ZCCHC18P0CG32 403 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 HOXB1P14653 301 aaPredicted RBP10.38□□□□□ -0.75
SPARC-206ENST00000524277 IDO1P14902 403 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 BGNP21810 368 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 CRISP3P54108 245 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 VLDLRP98155 873 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 PLAURQ03405 335 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 LARS2Q15031 903 aaKnown RBP10.38□□□□□ -0.75
SPARC-206ENST00000524277 C3orf36Q3SXR2 165 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 TNFAIP8L3Q5GJ75 292 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 OTUD3Q5T2D3 398 aaPredicted RBP10.38□□□□□ -0.75
SPARC-206ENST00000524277 MRPL2Q5T653 305 aaKnown RBP10.38□□□□□ -0.75
SPARC-206ENST00000524277 TSPO2Q5TGU0 170 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 HHATQ5VTY9 493 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 TMEM225Q6GV28 225 aa10.38□□□□□ -0.75
SPARC-206ENST00000524277 MSANTD1Q6ZTZ1 278 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms