RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 CLEC3AO75596 197 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 RAB3DO95716 219 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 AKAIN1P0CW23 69 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 GRK6P43250 576 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 CBX5P45973 191 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 LTBQ06643 244 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 SGCGQ13326 291 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 ETFDHQ16134 617 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 HTR3DQ70Z44 454 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 NRSN1Q8IZ57 195 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 LINC00518Q8N0U6 118 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 CPXM2Q8N436 756 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 OR10Z1Q8NGY1 313 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 DVL3Q92997 716 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-212ENST00000523387 OR1F2PQ96R84 312 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 LMF1Q96S06 567 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 CCDC3Q9BQI4 270 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 ZNF304Q9HCX3 659 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 CMC2Q9NRP2 79 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 BRCA1P38398 1863 aaKnown RBP8.36□□□□□ -1.07
CSMD1-212ENST00000523387 TBC1D3BA6NDS4 549 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 GLTPD2A6NH11 291 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 SNRPGP15A8MWD9 76 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 C1QTNF3-AMACRE9PGA6 284 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 CDC42EP2O14613 210 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 GPRIN2O60269 458 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 FADS1O60427 444 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 RECKO95980 971 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 DBIP07108 87 aaKnown RBP8.36□□□□□ -1.07
CSMD1-212ENST00000523387 ATP5A1P25705 553 aaKnown RBP8.36□□□□□ -1.07
CSMD1-212ENST00000523387 AQP2P41181 271 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 TRA2BP62995 288 aaKnown RBP8.36□□□□□ -1.07
CSMD1-212ENST00000523387 ACSM1Q08AH1 577 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 KLF9Q13886 244 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-212ENST00000523387 AGERQ15109 404 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 MRPL2Q5T653 305 aaKnown RBP8.36□□□□□ -1.07
CSMD1-212ENST00000523387 HSD17B13Q7Z5P4 300 aaPredicted RBP8.36□□□□□ -1.07
CSMD1-212ENST00000523387 AMER3Q8N944 861 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 STEAP2Q8NFT2 490 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 OR10G6Q8NH81 332 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 OR5AK2Q8NH90 309 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 ARL11Q969Q4 196 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 MS4A4EQ96PG1 132 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 NPAS1Q99742 590 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 ZNF350Q9GZX5 532 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 SLC38A1Q9H2H9 487 aa8.36□□□□□ -1.07
CSMD1-212ENST00000523387 A0A0D9SG52 128 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 URADA6NGE7 173 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 IFITM5A6NNB3 132 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 K7ESM1 405 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 GABRA1P14867 456 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 GABRA3P34903 492 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 CDK5R1Q15078 307 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 FAM76BQ5HYJ3 339 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 ALG10BQ5I7T1 473 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 OVCH1Q7RTY7 1134 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 OVCH2Q7RTZ1 564 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 NR2C2APQ86WQ0 139 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 EID2Q8N6I1 236 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 OR51S1Q8NGJ8 323 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 OR6N2Q8NGY6 317 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 OR2L2Q8NH16 312 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 WDR89Q96FK6 387 aaPredicted RBP8.35□□□□□ -1.07
CSMD1-212ENST00000523387 ZNF285Q96NJ3 590 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 CNTNAP3BQ96NU0 1288 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 ZNF559Q9BR84 538 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 SRA1Q9HD15 236 aaKnown RBP8.35□□□□□ -1.07
CSMD1-212ENST00000523387 RXFP3Q9NSD7 469 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 ADAM29Q9UKF5 820 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 ZNF281Q9Y2X9 895 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 SLC6A5Q9Y345 797 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 HYAL3O43820 417 aaPredicted RBP8.35□□□□□ -1.07
CSMD1-212ENST00000523387 VEGFDO43915 354 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 LCMT2O60294 686 aaKnown RBP8.35□□□□□ -1.07
CSMD1-212ENST00000523387 CDC40O60508 579 aaKnown RBP eCLIP8.35□□□□□ -1.07
CSMD1-212ENST00000523387 CD2P06729 351 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 OR2T7P0C7T2 308 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 TFPIP10646 304 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 BTCP35070 178 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 PCBP4P57723 403 aaKnown RBP8.35□□□□□ -1.07
CSMD1-212ENST00000523387 TAS2R20P59543 309 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 UBE2IP63279 158 aaKnown RBP8.35□□□□□ -1.07
CSMD1-212ENST00000523387 NKPD1Q17RQ9 610 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 DEFB134Q4QY38 66 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 KLHL26Q53HC5 615 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 POMZP3Q6PJE2 187 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 TMEM205Q6UW68 189 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 JAGN1Q8N5M9 183 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 OR2T27Q8NH04 317 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 BCL7CQ8WUZ0 217 aaPredicted RBP8.35□□□□□ -1.07
CSMD1-212ENST00000523387 LCN9Q8WX39 176 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 RELTQ969Z4 430 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 SMIM19Q96E16 107 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 LRIG1Q96JA1 1093 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 VRK1Q99986 396 aaPredicted RBP8.35□□□□□ -1.07
CSMD1-212ENST00000523387 HCAR1Q9BXC0 346 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 ZDHHC5Q9C0B5 715 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 ZMAT5Q9UDW3 170 aaKnown RBP8.35□□□□□ -1.07
CSMD1-212ENST00000523387 LAMP5Q9UJQ1 280 aa8.35□□□□□ -1.07
CSMD1-212ENST00000523387 TBC1D3KA0A087X1G2 549 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms