RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 EIF1BO60739 113 aaKnown RBP16.48■□□□□ 0.23
SPIDR-220ENST00000522900 SASH3O75995 380 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 AKR7A3O95154 331 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 CNOT4O95628 575 aaKnown RBP16.48■□□□□ 0.23
SPIDR-220ENST00000522900 GGT1P19440 569 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 NCF2P19878 526 aaPredicted RBP16.48■□□□□ 0.23
SPIDR-220ENST00000522900 IDUAP35475 653 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 MAP2K6P52564 334 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 BSPH1Q075Z2 132 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 FAPQ12884 760 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 FADDQ13158 208 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 PPA1Q15181 289 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 OR7A5Q15622 319 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 COMTD1Q86VU5 262 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 CIARTQ8N365 385 aaPredicted RBP16.48■□□□□ 0.23
SPIDR-220ENST00000522900 ZIC4Q8N9L1 334 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 OR52E4Q8NGH9 312 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 NFKBIDQ8NI38 313 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 BBS10Q8TAM1 723 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 MAGEB18Q96M61 343 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 USB1Q9BQ65 265 aaKnown RBP16.48■□□□□ 0.23
SPIDR-220ENST00000522900 RAD21L1Q9H4I0 556 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 IKZF5Q9H5V7 419 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 ESRP2Q9H6T0 727 aaKnown RBP16.48■□□□□ 0.23
SPIDR-220ENST00000522900 VIPAS39Q9H9C1 493 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 FLVCR1Q9Y5Y0 555 aa16.48■□□□□ 0.23
SPIDR-220ENST00000522900 OR5H1A6NKK0 313 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 RAD51DO75771 328 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 CD3EP07766 207 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 ARAFP10398 606 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 PTH2RP49190 550 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 ATP4BP51164 291 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 COPZ1P61923 177 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 SQLEQ14534 574 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 TIMM23BQ5SRD1 257 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 OTUD3Q5T2D3 398 aaPredicted RBP16.47■□□□□ 0.23
SPIDR-220ENST00000522900 GCNT6Q5T4J0 391 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 PRAMEF8Q5VWM4 474 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 PRAMEF7Q5VXH5 474 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 ADAM5Q6NVV9 412 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 PAQR6Q6TCH4 344 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 YTHDF3Q7Z739 585 aaKnown RBP16.47■□□□□ 0.23
SPIDR-220ENST00000522900 C3orf49Q96BT1 292 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 C18orf12Q96KH6 178 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 Q96MF0 132 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 NGBQ9NPG2 151 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 NPAP1Q9NZP6 1156 aa16.47■□□□□ 0.23
SPIDR-220ENST00000522900 FLNAP21333 2647 aaKnown RBP16.46■□□□□ 0.23
SPIDR-220ENST00000522900 A0A1W2PR80 420 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 CCT8L1PA6NM43 557 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 A8MVM7 634 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 C5orf58C9J3I9 102 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 TPST1O60507 370 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 GPIP06744 558 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 P2RY4P51582 365 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 ZSWIM7Q19AV6 140 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 C9orf135Q5VTT2 229 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 CASP12Q6UXS9 341 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 DLEU7Q6UYE1 221 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 KBTBD8Q8NFY9 601 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 OR52N5Q8NH56 324 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 TMEM171Q8WVE6 324 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 MUCL1Q96DR8 90 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 ZNF385AQ96PM9 386 aaKnown RBP16.46■□□□□ 0.23
SPIDR-220ENST00000522900 PRR14Q9BWN1 585 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 GSX2Q9BZM3 304 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 ARMC7Q9H6L4 198 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 CACYBPQ9HB71 228 aaKnown RBP16.46■□□□□ 0.23
SPIDR-220ENST00000522900 SLC7A10Q9NS82 523 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 ASB6Q9NWX5 421 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 MALT1Q9UDY8 824 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 DCTN4Q9UJW0 460 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 PRDM4Q9UKN5 801 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 LAMP3Q9UQV4 416 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 GMEB1Q9Y692 573 aa16.46■□□□□ 0.23
SPIDR-220ENST00000522900 A0A1W2PP18 115 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 CIB4A0PJX0 185 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 TMEM229AB2RXF0 380 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 PDLIM1O00151 329 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 NPIPB7O75200 414 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 SOD3P08294 240 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 ITGA5P08648 1049 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 INHBBP09529 407 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 ETS2P15036 469 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 GPX2P18283 190 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 CDK6Q00534 326 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 ADRM1Q16186 407 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 GABRA6Q16445 453 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 GLIPR1L2Q4G1C9 344 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 TSPO2Q5TGU0 170 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 C1orf140Q5VVS0 124 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 PRSS57Q6UWY2 283 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 Q71RC1 249 aaPredicted RBP16.45■□□□□ 0.22
SPIDR-220ENST00000522900 ZNF385DQ9H6B1 395 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 ZNF701Q9NV72 531 aaPredicted RBP16.45■□□□□ 0.22
SPIDR-220ENST00000522900 ARGLU1Q9NWB6 273 aaPredicted RBP16.45■□□□□ 0.22
SPIDR-220ENST00000522900 TMEM45AQ9NWC5 275 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 ADPRHL2Q9NX46 363 aa16.45■□□□□ 0.22
SPIDR-220ENST00000522900 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.45■□□□□ 0.22
SPIDR-220ENST00000522900 SLC9A8Q9Y2E8 581 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms