RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 DPY19L1Q2PZI1 675 aa17.76■□□□□ 0.43
PABPC1-217ENST00000521067 TMEM249Q2WGJ8 235 aa17.76■□□□□ 0.43
PABPC1-217ENST00000521067 ELOA3BQ3SY89 546 aa17.76■□□□□ 0.43
PABPC1-217ENST00000521067 C6orf52Q5T4I8 152 aa17.76■□□□□ 0.43
PABPC1-217ENST00000521067 CMIPQ8IY22 773 aa17.76■□□□□ 0.43
PABPC1-217ENST00000521067 LRRC34Q8IZ02 419 aa17.76■□□□□ 0.43
PABPC1-217ENST00000521067 ELOA3Q8NG57 546 aa17.76■□□□□ 0.43
PABPC1-217ENST00000521067 DDIT4LQ96D03 193 aa17.76■□□□□ 0.43
PABPC1-217ENST00000521067 TNFRSF13CQ96RJ3 184 aa17.76■□□□□ 0.43
PABPC1-217ENST00000521067 MTHFD2LQ9H903 347 aaPredicted RBP17.76■□□□□ 0.43
PABPC1-217ENST00000521067 DCTN4Q9UJW0 460 aa17.76■□□□□ 0.43
PABPC1-217ENST00000521067 FAAHO00519 579 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 SDHDO14521 159 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 RGS16O15492 202 aaPredicted RBP17.75■□□□□ 0.43
PABPC1-217ENST00000521067 LY6HO94772 140 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 HPCAP84074 193 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 LOXL1Q08397 574 aaPredicted RBP17.75■□□□□ 0.43
PABPC1-217ENST00000521067 STX3Q13277 289 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 MRPL2Q5T653 305 aaKnown RBP17.75■□□□□ 0.43
PABPC1-217ENST00000521067 OGFOD2Q6N063 350 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 WDR93Q6P2C0 686 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 PAQR6Q6TCH4 344 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 CLEC2AQ6UVW9 174 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 ZNF621Q6ZSS3 439 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 PHC2Q8IXK0 858 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 TMEM99Q8N816 258 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 PNPT1Q8TCS8 783 aaKnown RBP17.75■□□□□ 0.43
PABPC1-217ENST00000521067 PMM1Q92871 262 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 TRIM44Q96DX7 344 aaPredicted RBP17.75■□□□□ 0.43
PABPC1-217ENST00000521067 ZNF385AQ96PM9 386 aaKnown RBP17.75■□□□□ 0.43
PABPC1-217ENST00000521067 PANX1Q96RD7 426 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 NAA11Q9BSU3 229 aaPredicted RBP17.75■□□□□ 0.43
PABPC1-217ENST00000521067 REPIN1Q9BWE0 567 aaKnown RBP17.75■□□□□ 0.43
PABPC1-217ENST00000521067 MANSC1Q9H8J5 431 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 SSU72Q9NP77 194 aaKnown RBP17.75■□□□□ 0.43
PABPC1-217ENST00000521067 SLC6A13Q9NSD5 602 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 AIG1Q9NVV5 245 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 PARPBPQ9NWS1 579 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 UPB1Q9UBR1 384 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 SLC9A8Q9Y2E8 581 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 ATP23Q9Y6H3 246 aa17.75■□□□□ 0.43
PABPC1-217ENST00000521067 HEATR1Q9H583 2144 aaKnown RBP17.75■□□□□ 0.43
PABPC1-217ENST00000521067 CFAP73A6NFT4 308 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 RNF212BA8MTL3 300 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 H7C417 338 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 AKR7A3O95154 331 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 GKN3PP0CG01 181 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 IL7RP16871 459 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 ACAA2P42765 397 aaKnown RBP17.74■□□□□ 0.43
PABPC1-217ENST00000521067 DSCR9P59020 149 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 BST1Q10588 318 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 CEACAM7Q14002 265 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 MST1LQ2TV78 715 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 TNFAIP8L3Q5GJ75 292 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 ZNF544Q6NX49 715 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 PODNL1Q6PEZ8 512 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 DEPDC4Q8N2C3 294 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 MREGQ8N565 214 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 WDR60Q8WVS4 1066 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.74■□□□□ 0.43
PABPC1-217ENST00000521067 GPR45Q9Y5Y3 372 aa17.74■□□□□ 0.43
PABPC1-217ENST00000521067 V9GYY5 206 aaPredicted RBP17.74■□□□□ 0.43
PABPC1-217ENST00000521067 LIPT2A6NK58 231 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 KLF11O14901 512 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 TM9SF1O15321 606 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 PGRP06401 933 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 NR2F1P10589 423 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 MPGP29372 298 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 P2RY4P51582 365 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 MVDP53602 400 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 VLDLRP98155 873 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 BNIP2Q12982 314 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 CHRFAM7AQ494W8 412 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 OTUD3Q5T2D3 398 aaPredicted RBP17.73■□□□□ 0.43
PABPC1-217ENST00000521067 VRK2Q86Y07 508 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 C1orf162Q8NEQ5 155 aaPredicted RBP17.73■□□□□ 0.43
PABPC1-217ENST00000521067 C10orf105Q8TEF2 133 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 TMEM45BQ96B21 275 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 OR52E6Q96RD3 313 aa17.73■□□□□ 0.43
PABPC1-217ENST00000521067 WDR55Q9H6Y2 383 aaPredicted RBP17.73■□□□□ 0.43
PABPC1-217ENST00000521067 YLPM1P49750 1951 aaKnown RBP17.73■□□□□ 0.43
PABPC1-217ENST00000521067 ATP6V1G2-DDX39BF2Z307 99 aa17.72■□□□□ 0.43
PABPC1-217ENST00000521067 SNUPNO95149 360 aaKnown RBP17.72■□□□□ 0.43
PABPC1-217ENST00000521067 IFNA2P01563 188 aa17.72■□□□□ 0.43
PABPC1-217ENST00000521067 DBIP07108 87 aaKnown RBP17.72■□□□□ 0.43
PABPC1-217ENST00000521067 CDH2P19022 906 aaPredicted RBP17.72■□□□□ 0.43
PABPC1-217ENST00000521067 APOBEC3AP31941 199 aaPredicted RBP17.72■□□□□ 0.43
PABPC1-217ENST00000521067 LGALS3BPQ08380 585 aa17.72■□□□□ 0.43
PABPC1-217ENST00000521067 OR7A5Q15622 319 aa17.72■□□□□ 0.43
PABPC1-217ENST00000521067 SWI5Q1ZZU3 235 aa17.72■□□□□ 0.43
PABPC1-217ENST00000521067 HIKESHIQ53FT3 197 aa17.72■□□□□ 0.43
PABPC1-217ENST00000521067 C17orf78Q8N4C9 275 aa17.72■□□□□ 0.43
PABPC1-217ENST00000521067 TRIML2Q8N7C3 387 aa17.72■□□□□ 0.43
PABPC1-217ENST00000521067 OR9K2Q8NGE7 335 aa17.72■□□□□ 0.43
PABPC1-217ENST00000521067 MOKQ9UQ07 419 aa17.72■□□□□ 0.43
PABPC1-217ENST00000521067 AMDHD2Q9Y303 409 aa17.72■□□□□ 0.43
PABPC1-217ENST00000521067 CHST2Q9Y4C5 530 aa17.72■□□□□ 0.43
PABPC1-217ENST00000521067 CDHR4A6H8M9 788 aa17.71■□□□□ 0.43
PABPC1-217ENST00000521067 AQP7P3A6NL99 342 aa17.71■□□□□ 0.43
PABPC1-217ENST00000521067 PRG2P13727 222 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms