RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 SEC14L4Q9UDX3 406 aa11.79□□□□□ -0.52
VEGFA-219ENST00000518824 NDRG3Q9UGV2 375 aa11.79□□□□□ -0.52
VEGFA-219ENST00000518824 CORO2BQ9UQ03 480 aa11.79□□□□□ -0.52
VEGFA-219ENST00000518824 TRAPPC4Q9Y296 219 aa11.79□□□□□ -0.52
VEGFA-219ENST00000518824 PLEKHA6Q9Y2H5 1048 aa11.79□□□□□ -0.52
VEGFA-219ENST00000518824 CAPN7Q9Y6W3 813 aa11.79□□□□□ -0.52
VEGFA-219ENST00000518824 IGKV1D-42A0A075B6H8 117 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 IGKV3D-15A0A087WSY6 115 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 CCT8L1PA6NM43 557 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 ZNF724A8MTY0 619 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 KLF4O43474 513 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 UQCRBP14927 111 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 CD247P20963 164 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 CRYGSP22914 178 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 PCGF2P35227 344 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 IDUAP35475 653 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 IST1P53990 364 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 COPZ1P61923 177 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 MMEL1Q495T6 779 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 C1orf140Q5VVS0 124 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 KRT73Q86Y46 540 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 ARMC8Q8IUR7 673 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 S100PBPQ96BU1 408 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 RCN3Q96D15 328 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 KTI12Q96EK9 354 aaPredicted RBP11.78□□□□□ -0.52
VEGFA-219ENST00000518824 POTEKPQ9BYX7 375 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 ACTR6Q9GZN1 396 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 FAM107BQ9H098 131 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 CACYBPQ9HB71 228 aaKnown RBP11.78□□□□□ -0.52
VEGFA-219ENST00000518824 GP6Q9HCN6 339 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 ADPRHL2Q9NX46 363 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 ANGPT4Q9Y264 503 aa11.78□□□□□ -0.52
VEGFA-219ENST00000518824 A8MVM7 634 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 CASKO14936 926 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 LYZL6O75951 148 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 LGI1O95970 557 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 PLAUP00749 431 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 THY1P04216 161 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 TNFRSF1BP20333 461 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 PSMB1P20618 241 aaKnown RBP11.77□□□□□ -0.53
VEGFA-219ENST00000518824 DRD4P21917 467 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 IGHV1-2P23083 117 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 RPS5P46782 204 aaKnown RBP11.77□□□□□ -0.53
VEGFA-219ENST00000518824 SLC16A1P53985 500 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 RGS8P57771 180 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-219ENST00000518824 SLC35A1P78382 337 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 RBBP4Q09028 425 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 CYLC2Q14093 348 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-219ENST00000518824 SLC17A1Q14916 467 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 PDK3Q15120 406 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 TESK1Q15569 626 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 OR1Q1Q15612 314 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 NRF1Q16656 503 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 ZSWIM7Q19AV6 140 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 VMACQ2NL98 169 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 OTUD3Q5T2D3 398 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-219ENST00000518824 SFRP5Q5T4F7 317 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 FBXW10Q5XX13 1052 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 ALKBH2Q6NS38 261 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 GALNT5Q7Z7M9 940 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 STK32CQ86UX6 486 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 WFDC8Q8IUA0 241 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 KDM8Q8N371 416 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 ZIC4Q8N9L1 334 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 OR52E4Q8NGH9 312 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 PIGXQ8TBF5 258 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 SLC35B4Q969S0 331 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 PIK3IP1Q96FE7 263 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 ZNF583Q96ND8 569 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 ZNF385AQ96PM9 386 aaKnown RBP11.77□□□□□ -0.53
VEGFA-219ENST00000518824 ZNF607Q96SK3 696 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 ARHGDIGQ99819 225 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 SPATA5L1Q9BVQ7 753 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 ARMC7Q9H6L4 198 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 CCM2LQ9NUG4 571 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-219ENST00000518824 ST6GALNAC2Q9UJ37 374 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 FLVCR1Q9Y5Y0 555 aa11.77□□□□□ -0.53
VEGFA-219ENST00000518824 FTCDNL1E5RQL4 147 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 DNPH1O43598 174 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 LYPD3O95274 346 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 COX4I1P13073 169 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 CBLP22681 906 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 FKBP2P26885 142 aaKnown RBP11.76□□□□□ -0.53
VEGFA-219ENST00000518824 LSP1P33241 339 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 LTBQ06643 244 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 LGALS3BPQ08380 585 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 COQ5Q5HYK3 327 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 PAQR6Q6TCH4 344 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 C6orf89Q6UWU4 347 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 SEZ6L2Q6UXD5 910 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 WDR88Q6ZMY6 472 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 SPATA21Q7Z572 469 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 LSMEM1Q8N8F7 131 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 OR6T1Q8NGN1 323 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 VANGL1Q8TAA9 524 aaPredicted RBP11.76□□□□□ -0.53
VEGFA-219ENST00000518824 TAAR8Q969N4 342 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 SLC25A36Q96CQ1 311 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 ZHX1-C8orf76Q96EF9 292 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 CMTM6Q9NX76 183 aa11.76□□□□□ -0.53
VEGFA-219ENST00000518824 GPR52Q9Y2T5 361 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms