RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 PEX19P40855 299 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 MNAT1P51948 309 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 RASGEF1BQ0VAM2 473 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 CYBRD1Q53TN4 286 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 TMEM201Q5SNT2 666 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 C1orf140Q5VVS0 124 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 ABLIM2Q6H8Q1 611 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 ZNF613Q6PF04 617 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 TUSC5Q8IXB3 177 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 OR4D11Q8NGI4 311 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 BCAS4Q8TDM0 211 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 SLC38A4Q969I6 547 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 MARVELD3Q96A59 401 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 SLC47A1Q96FL8 570 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 PSD2Q9BQI7 771 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 OPN3Q9H1Y3 402 aaPredicted RBP19.6■□□□□ 0.73
VEGFA-217ENST00000518538 BCO1Q9HAY6 547 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 PLSCR4Q9NRQ2 329 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 NDE1Q9NXR1 346 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 ADA2Q9NZK5 511 aa19.6■□□□□ 0.73
VEGFA-217ENST00000518538 LIPT2A6NK58 231 aa19.59■□□□□ 0.73
VEGFA-217ENST00000518538 CXCR6O00574 342 aa19.59■□□□□ 0.73
VEGFA-217ENST00000518538 EIF1BO60739 113 aaKnown RBP19.59■□□□□ 0.73
VEGFA-217ENST00000518538 GPIP06744 558 aa19.59■□□□□ 0.73
VEGFA-217ENST00000518538 YES1P07947 543 aa19.59■□□□□ 0.73
VEGFA-217ENST00000518538 FPR1P21462 350 aa19.59■□□□□ 0.73
VEGFA-217ENST00000518538 H3F3AP84243 136 aa19.59■□□□□ 0.73
VEGFA-217ENST00000518538 PDK3Q15120 406 aa19.59■□□□□ 0.73
VEGFA-217ENST00000518538 SWT1Q5T5J6 900 aaKnown RBP19.59■□□□□ 0.73
VEGFA-217ENST00000518538 KIF18BQ86Y91 864 aa19.59■□□□□ 0.73
VEGFA-217ENST00000518538 RBM45Q8IUH3 476 aaKnown RBP19.59■□□□□ 0.73
VEGFA-217ENST00000518538 PIGXQ8TBF5 258 aa19.59■□□□□ 0.73
VEGFA-217ENST00000518538 PCDHAC1Q9H158 963 aa19.59■□□□□ 0.73
VEGFA-217ENST00000518538 SLC24A3Q9HC58 644 aa19.59■□□□□ 0.73
VEGFA-217ENST00000518538 GALNT8Q9NY28 637 aa19.59■□□□□ 0.73
VEGFA-217ENST00000518538 ING1Q9UK53 422 aaPredicted RBP19.59■□□□□ 0.73
VEGFA-217ENST00000518538 SH3GLB1Q9Y371 365 aa19.59■□□□□ 0.73
VEGFA-217ENST00000518538 A0A087WUJ7 227 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 AHSA1O95433 338 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 SORDQ00796 357 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 EGR4Q05215 589 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 CEACAM7Q14002 265 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 OR7A5Q15622 319 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 ENTPD8Q5MY95 495 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 ZNF474Q6S9Z5 364 aaPredicted RBP19.58■□□□□ 0.72
VEGFA-217ENST00000518538 PAQR6Q6TCH4 344 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 C5orf46Q6UWT4 87 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 C16orf89Q6UX73 402 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 CARM1Q86X55 608 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 ZNF610Q8N9Z0 462 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 NSL1Q96IY1 281 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 NAA11Q9BSU3 229 aaPredicted RBP19.58■□□□□ 0.72
VEGFA-217ENST00000518538 TAPBPLQ9BX59 468 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 ADPRHL2Q9NX46 363 aa19.58■□□□□ 0.72
VEGFA-217ENST00000518538 CPSF4LA6NMK7 179 aaKnown RBP19.57■□□□□ 0.72
VEGFA-217ENST00000518538 ZNF724A8MTY0 619 aa19.57■□□□□ 0.72
VEGFA-217ENST00000518538 GGT1P19440 569 aa19.57■□□□□ 0.72
VEGFA-217ENST00000518538 CPOXP36551 454 aa19.57■□□□□ 0.72
VEGFA-217ENST00000518538 PCYT1AP49585 367 aa19.57■□□□□ 0.72
VEGFA-217ENST00000518538 CDH12P55289 794 aa19.57■□□□□ 0.72
VEGFA-217ENST00000518538 SELENOWP63302 87 aa19.57■□□□□ 0.72
VEGFA-217ENST00000518538 MXRA7P84157 204 aa19.57■□□□□ 0.72
VEGFA-217ENST00000518538 SLC25A3Q00325 362 aa19.57■□□□□ 0.72
VEGFA-217ENST00000518538 RNF217Q8TC41 542 aa19.57■□□□□ 0.72
VEGFA-217ENST00000518538 ADAMTS16Q8TE57 1224 aa19.57■□□□□ 0.72
VEGFA-217ENST00000518538 LZICQ8WZA0 190 aa19.57■□□□□ 0.72
VEGFA-217ENST00000518538 ZNF300Q96RE9 604 aaPredicted RBP19.57■□□□□ 0.72
VEGFA-217ENST00000518538 IGKV1D-42A0A075B6H8 117 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 IGKV3D-15A0A087WSY6 115 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 TRAPPC13A5PLN9 417 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 ZNF716A6NP11 495 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 ZNF814B7Z6K7 855 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 CHP2O43745 196 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 TNFRSF1BP20333 461 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 SLC16A1P53985 500 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 NUFIP2Q7Z417 695 aaKnown RBP19.56■□□□□ 0.72
VEGFA-217ENST00000518538 CCDC103Q8IW40 242 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 MFSD8Q8NHS3 518 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 KTI12Q96EK9 354 aaPredicted RBP19.56■□□□□ 0.72
VEGFA-217ENST00000518538 TPD52L3Q96J77 140 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 PTDSS2Q9BVG9 487 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 C12orf49Q9H741 205 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 ELOVL5Q9NYP7 299 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 EMC3Q9P0I2 261 aa19.56■□□□□ 0.72
VEGFA-217ENST00000518538 RAMP1O60894 148 aa19.55■□□□□ 0.72
VEGFA-217ENST00000518538 HSD17B1P14061 328 aa19.55■□□□□ 0.72
VEGFA-217ENST00000518538 CALB2P22676 271 aa19.55■□□□□ 0.72
VEGFA-217ENST00000518538 CD79BP40259 229 aa19.55■□□□□ 0.72
VEGFA-217ENST00000518538 RPS5P46782 204 aaKnown RBP19.55■□□□□ 0.72
VEGFA-217ENST00000518538 SNTB1Q13884 538 aaKnown RBP19.55■□□□□ 0.72
VEGFA-217ENST00000518538 SAMD4BQ5PRF9 694 aaKnown RBP19.55■□□□□ 0.72
VEGFA-217ENST00000518538 OTUD3Q5T2D3 398 aaPredicted RBP19.55■□□□□ 0.72
VEGFA-217ENST00000518538 CBLL1Q75N03 491 aa19.55■□□□□ 0.72
VEGFA-217ENST00000518538 STK32CQ86UX6 486 aa19.55■□□□□ 0.72
VEGFA-217ENST00000518538 TSPYL5Q86VY4 417 aaPredicted RBP19.55■□□□□ 0.72
VEGFA-217ENST00000518538 DEFB107AQ8IZN7 70 aa19.55■□□□□ 0.72
VEGFA-217ENST00000518538 RNF148Q8N7C7 305 aa19.55■□□□□ 0.72
VEGFA-217ENST00000518538 FAM162AQ96A26 154 aa19.55■□□□□ 0.72
VEGFA-217ENST00000518538 TMEM43Q9BTV4 400 aa19.55■□□□□ 0.72
VEGFA-217ENST00000518538 POLR2J2Q9GZM3 115 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms