RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 NCK1P16333 377 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 CPEP16870 476 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SDC1P18827 310 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 CXCL3P19876 107 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 PSMB1P20618 241 aaKnown RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 MPZP25189 248 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 GABRR2P28476 465 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 CD1BP29016 333 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 C21orf33P30042 268 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 CSF2RBP32927 897 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 FAUP35544 74 aaKnown RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 NAA10P41227 235 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 BDKRB1P46663 353 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 DAPP51397 102 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 MMP15P51511 669 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SUOXP51687 545 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 CRYBB1P53674 252 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 PTTG1IPP53801 180 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 DAOAP59103 153 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 LSM6P62312 80 aaKnown RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SELENOTP62341 195 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 NAAAQ02083 359 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC10A7Q0GE19 358 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 PJVKQ0ZLH3 352 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 TCP10Q12799 353 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SKP2Q13309 424 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC14A1Q13336 389 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 GAMTQ14353 236 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 RBMS2Q15434 407 aaKnown RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SURF2Q15527 256 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 TAF9Q16594 264 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 IQCJQ1A5X6 159 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 GFOD2Q3B7J2 385 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 C2orf76Q3KRA6 126 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 ATP6AP1LQ52LC2 224 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 RFTN2Q52LD8 501 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 C2orf27AQ580R0 203 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF311Q5JNZ3 666 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 GCNT6Q5T4J0 391 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 PHF19Q5T6S3 580 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 TSTD2Q5T7W7 516 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 PRAMEF18Q5VWM3 479 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 CXorf57Q6NSI4 855 aaKnown RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 TMEM71Q6P5X7 295 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF549Q6P9A3 640 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF613Q6PF04 617 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 TRMT10BQ6PF06 316 aaKnown RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 FBXO46Q6PJ61 603 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 DRAM2Q6UX65 266 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 GRINAQ7Z429 371 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 ADGRA1Q86SQ6 560 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 CYP4Z1Q86W10 505 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 THNSL2Q86YJ6 484 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 DENND1CQ8IV53 801 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLC41A1Q8IVJ1 513 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZDHHC21Q8IVQ6 265 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 FOXRED2Q8IWF2 684 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 BAP18Q8IXM2 172 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 LGI4Q8N135 537 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 CPXM2Q8N436 756 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 FBXO39Q8N4B4 442 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 HDDC3Q8N4P3 179 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 CELF5Q8N6W0 485 aaKnown RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 PNLDC1Q8NA58 520 aaKnown RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SDR9C7Q8NEX9 313 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 DNERQ8NFT8 737 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR10D4PQ8NGN7 298 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR5M3Q8NGP4 307 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR1J1Q8NGS3 322 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR14K1Q8NGZ2 314 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 OR8U1Q8NH10 309 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 PCDH19Q8TAB3 1148 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 ORAOV1Q8WV07 137 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 PCNPQ8WW12 178 aaKnown RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 KCNE4Q8WWG9 221 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 DNASE1L2Q92874 299 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 TM4SF18Q96CE8 201 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 BPIFA2Q96DR5 249 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SPACA9Q96E40 222 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 TMEM19Q96HH6 336 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 ADGRG7Q96K78 797 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF48Q96MX3 618 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 FAM193BQ96PV7 902 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 DDOQ99489 341 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 POTEKPQ9BYX7 375 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 ST6GALNAC4Q9H4F1 302 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 SMDT1Q9H4I9 107 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 CWH43Q9H720 699 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 TPT1P8Q9HAU6 139 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 BARX1Q9HBU1 254 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 MSL2Q9HCI7 577 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 LYRM2Q9NU23 88 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 TMEM184CQ9NVA4 438 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 TXNL4BQ9NX01 149 aaKnown RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 TAS2R5Q9NYW4 299 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 COMMD9Q9P000 198 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 NCDNQ9UBB6 729 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 COMMD3Q9UBI1 195 aa4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 ZNF282Q9UDV7 671 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P19-201ENST00000517578 OPN4Q9UHM6 478 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms