RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 RFXANKO14593 260 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 TFECO14948 347 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SNAI2O43623 268 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 CXCL13O43927 109 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 OR10H3O60404 316 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 EIF4E2O60573 245 aaKnown RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SLC19A2O60779 497 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 NADKO95544 446 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ETHE1O95571 254 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 CD160O95971 181 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 CELA2AP08217 269 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 KRT16P08779 473 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 RD3LP0DJH9 198 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ZNF26P17031 533 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 HOXB8P17481 243 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SDC1P18827 310 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 NPR2P20594 1047 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 IL32P24001 234 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 IFNA8P32881 189 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SPAM1P38567 509 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SLC1A1P43005 524 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 HAAOP46952 286 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 CX3CR1P49238 355 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 MRPL19P49406 292 aaKnown RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 DAP3P51398 398 aaKnown RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 CCNHP51946 323 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 CLDN18P56856 261 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 OR2B6P58173 313 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 DHODHQ02127 395 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 COL10A1Q03692 680 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 RIPPLY1Q0D2K3 151 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SCRN3Q0VDG4 424 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 TRAF2Q12933 501 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ZNF154Q13106 437 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ITGB3BPQ13352 177 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 KLF9Q13886 244 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 DPYSL3Q14195 570 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 PIGHQ14442 188 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 MLF2Q15773 248 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 USF2Q15853 346 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ZIC1Q15915 447 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SRSF7Q16629 238 aaKnown RBP eCLIP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 HLA-BQ31612 363 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SLC22A6Q4U2R8 563 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 XKR4Q5GH76 650 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SAMD4BQ5PRF9 694 aaKnown RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ZNF57Q68EA5 555 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 PVRIGQ6DKI7 326 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 PCSK4Q6UW60 755 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SH2D5Q6ZV89 423 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 CREB3L2Q70SY1 520 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 FRA10AC1Q70Z53 315 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SLC26A9Q7LBE3 791 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 IFNEQ86WN2 208 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 HOGA1Q86XE5 327 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 Q8N3U1 123 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ZNF491Q8N8L2 437 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 GATSQ8NAP1 163 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 OR9A4Q8NGU2 314 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 LYPD6BQ8NI32 183 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ZPLD1Q8TCW7 415 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 GPR151Q8TDV0 419 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 UFD1Q92890 307 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ISOC2Q96AB3 205 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 FAM131CQ96AQ9 280 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ZNF514Q96K75 400 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 NSMCE3Q96MG7 304 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 OXGR1Q96P68 337 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 OPALINQ96PE5 141 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 MS4A4EQ96PG1 132 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 XPO6Q96QU8 1125 aaKnown RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 EPYCQ99645 322 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 NAPGQ99747 312 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ZNF670Q9BS34 389 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SLC35A5Q9BS91 424 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 CABLES2Q9BTV7 478 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 MAP1LC3CQ9BXW4 147 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 BEX2Q9BXY8 128 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 RAB34Q9BZG1 259 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ACTR3CQ9C0K3 210 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 NAT10Q9H0A0 1025 aaKnown RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 OR52A5Q9H2C5 316 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 RBKSQ9H477 322 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 RANBP3Q9H6Z4 567 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 NIPAL2Q9H841 368 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 THUMPD1Q9NXG2 353 aaKnown RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 STMN3Q9NZ72 180 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 WRAP73Q9P2S5 460 aaPredicted RBP2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SLC2A6Q9UGQ3 507 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 LNPEPQ9UIQ6 1025 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 FBXO7Q9Y3I1 522 aa2.25□□□□□ -2.05
SCARNA11.3-201ENST00000517276 USP47Q96K76 1375 aa2.24□□□□□ -2.05
SCARNA11.3-201ENST00000517276 PLEKHH1Q9ULM0 1364 aa2.24□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ZNF521Q96K83 1311 aa2.24□□□□□ -2.05
SCARNA11.3-201ENST00000517276 TRBV7-9A0A0J9YWB2 115 aa2.24□□□□□ -2.05
SCARNA11.3-201ENST00000517276 C1orf232A0A0U1RR37 186 aa2.24□□□□□ -2.05
SCARNA11.3-201ENST00000517276 A0A1W2PQ72 361 aa2.24□□□□□ -2.05
SCARNA11.3-201ENST00000517276 A0A1W2PRD5 423 aa2.24□□□□□ -2.05
SCARNA11.3-201ENST00000517276 A0A1W2PS18 150 aa2.24□□□□□ -2.05
SCARNA11.3-201ENST00000517276 OR5B21A6NL26 309 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms