RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 FLYWCH2Q96CP2 140 aaKnown RBP-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 SAT2Q96F10 170 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 CCDC34Q96HJ3 373 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 AKR1E2Q96JD6 320 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 C12orf42Q96LP6 360 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 OR2V2Q96R30 315 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 AGPAT1Q99943 283 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 KLHDC3Q9BQ90 382 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 C1orf50Q9BV19 199 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 RABEP2Q9H5N1 569 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 SYNDIG1Q9H7V2 258 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 CA10Q9NS85 328 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 SEPT10Q9P0V9 454 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 C5AR2Q9P296 337 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 APPL1Q9UKG1 709 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 PLLPQ9Y342 182 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 RPRD2Q5VT52 1461 aaKnown RBP-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 FREM1Q5H8C1 2179 aa-2.23□□□□□ -2.77
RNU6-539P-201ENST00000516665 PHF3Q92576 2039 aaKnown RBP-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 ERICH4A6NGS2 130 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 GLOD5A6NK44 160 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 A8MWP4 228 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 H0YJW9 148 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 SYT7O43581 403 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 ENTPD3O75355 529 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 SCELO95171 688 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 MOCS2O96007 188 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 POLBP06746 335 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 ZNF705DP0CH99 300 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 ZNF705BP0CI00 300 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 ATP1B2P14415 290 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 CD1CP29017 333 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 NMT1P30419 496 aaKnown RBP-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 MPV17P39210 176 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 VDAC2P45880 294 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 SLC6A8P48029 635 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 MFAP3P55082 362 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 RAB35Q15286 201 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 SPHARQ15513 63 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 FUT11Q495W5 492 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 DUSP28Q4G0W2 176 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 PDZD11Q5EBL8 140 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 DDI2Q5TDH0 399 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 ZNF767PQ75MW2 155 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 PAQR7Q86WK9 346 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 CALHM1Q8IU99 346 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 ZNF444Q8N0Y2 327 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 SIX6OS1Q8N1H7 587 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 ZNRF2Q8NHG8 242 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 NCOA7Q8NI08 942 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 BRSK1Q8TDC3 778 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 OR5P3Q8WZ94 311 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 INPP5KQ9BT40 448 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 MUC13Q9H3R2 512 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 OSGEPL1Q9H4B0 414 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 KIR3DX1Q9H7L2 352 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 UBE2ZQ9H832 354 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 OLAHQ9NV23 265 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 HAO2Q9NYQ3 351 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 DOK5Q9P104 306 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 ENOPH1Q9UHY7 261 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 ARHGAP26Q9UNA1 814 aa-2.24□□□□□ -2.77
RNU6-539P-201ENST00000516665 A6NIZ1 184 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 EIF3FO00303 357 aaPredicted RBP-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 SELENOFO60613 162 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 MMP7P09237 267 aaPredicted RBP-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 GCFC2P16383 781 aaKnown RBP-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 NTF3P20783 257 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 MAT2AP31153 395 aaKnown RBP-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 FMO3P31513 532 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 EPHX2P34913 555 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 CTNNA1P35221 906 aaKnown RBP-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 RPL13AP40429 203 aaKnown RBP-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 KPNA2P52292 529 aaKnown RBP-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 LIMK1P53667 647 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 RAP1BP61224 184 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 RND3P61587 244 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 CETN1Q12798 172 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 PTPRCAPQ14761 206 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 SNRNP35Q16560 246 aaKnown RBP-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 DUSP7Q16829 419 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 PGGHGQ32M88 737 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 TTLL9Q3SXZ7 439 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 Q5BKY6 102 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 ACAD10Q6JQN1 1059 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 TMIGD1Q6UXZ0 262 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 CYHR1Q6ZMK1 362 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 SNX20Q7Z614 316 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 COA5Q86WW8 74 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 C10orf126Q8N4M7 172 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 FGF14Q92915 247 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 ZNF622Q969S3 477 aaKnown RBP eCLIP-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 ZUFSPQ96AP4 578 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 OTUB2Q96DC9 234 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 CMTM5Q96DZ9 223 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 CCT7Q99832 543 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 SPATA16Q9BXB7 569 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 KLHL4Q9C0H6 718 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 CTPS2Q9NRF8 586 aa-2.25□□□□□ -2.77
RNU6-539P-201ENST00000516665 DDX28Q9NUL7 540 aaKnown RBP-2.25□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms