RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 ARID1BQ8NFD5 2236 aaPredicted RBP13.94□□□□□ -0.18
SDHA-218ENST00000515752 MCIDASD6RGH6 385 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 OIP5O43482 229 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 HIST1H2ABP04908 130 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 OR2T7P0C7T2 308 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 CXCR1P25024 350 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 ITPKBP27987 946 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 TACR3P29371 465 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 P2RX1P51575 399 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 EMP2P54851 167 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 SLC26A5P58743 744 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 OXA1LQ15070 435 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 HIST3H2AQ7L7L0 130 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 CCDC190Q86UF4 302 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 KLBQ86Z14 1044 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 MAML2Q8IZL2 1156 aaPredicted RBP13.94□□□□□ -0.18
SDHA-218ENST00000515752 C10orf53Q8N6V4 93 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 LRRC17Q8N6Y2 441 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 OR2T27Q8NH04 317 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 OR4K13Q8NH42 304 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 SMPDL3BQ92485 455 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 HIST1H2ACQ93077 130 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 TRMT61AQ96FX7 289 aaKnown RBP13.94□□□□□ -0.18
SDHA-218ENST00000515752 WDFY2Q96P53 400 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 SLC30A2Q9BRI3 323 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 SYNDIG1Q9H7V2 258 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 FKRPQ9H9S5 495 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 SMURF1Q9HCE7 757 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 TOR4AQ9NXH8 423 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 DAPK2Q9UIK4 370 aa13.94□□□□□ -0.18
SDHA-218ENST00000515752 COL5A1P20908 1838 aaPredicted RBP13.93□□□□□ -0.18
SDHA-218ENST00000515752 CDC14CA4D256 554 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 FADS1O60427 444 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 CD14P08571 375 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 ASAH2BP0C7U1 165 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 FGF5P12034 268 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 GP1BBP13224 206 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 CFL1P23528 166 aaKnown RBP13.93□□□□□ -0.18
SDHA-218ENST00000515752 F8A1P23610 371 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 EVI2BP34910 448 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 ACTA2P62736 377 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 ACTG2P63267 376 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 ATP1A4Q13733 1029 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.93□□□□□ -0.182e-6■■□□□ 11.5
SDHA-218ENST00000515752 TBC1D25Q3MII6 688 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 SLC23A3Q6PIS1 610 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 C5orf46Q6UWT4 87 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 MARCH3Q86UD3 253 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 EGFL6Q8IUX8 553 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 PARP16Q8N5Y8 322 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 ARIH2OSQ8N7S6 290 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 CYB561A3Q8NBI2 242 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 SLC38A9Q8NBW4 561 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 NFAM1Q8NET5 270 aaPredicted RBP13.93□□□□□ -0.18
SDHA-218ENST00000515752 B4GALNT2Q8NHY0 566 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 CNN2Q99439 309 aaKnown RBP13.93□□□□□ -0.18
SDHA-218ENST00000515752 PHOX2BQ99453 314 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 LPAR4Q99677 370 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 TM9SF2Q99805 663 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 CCDC32Q9BV29 185 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 NXT1Q9UKK6 140 aaKnown RBP13.93□□□□□ -0.18
SDHA-218ENST00000515752 NPFFR2Q9Y5X5 522 aa13.93□□□□□ -0.18
SDHA-218ENST00000515752 hCG_2014768A0A024R1R8 64 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 SLC35F4A4IF30 521 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 LALBAP00709 142 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 MT-ATP6P00846 226 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 HTR3AP46098 478 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 DIO1P49895 249 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 FABP5Q01469 135 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 ALG10Q5BKT4 473 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 ZNF385CQ66K41 422 aaPredicted RBP13.92□□□□□ -0.18
SDHA-218ENST00000515752 FCRLBQ6BAA4 426 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 TMEM99Q8N816 258 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 NPEPL1Q8NDH3 523 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 SDR9C7Q8NEX9 313 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 TMEM234Q8WY98 164 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 ABTB1Q969K4 478 aaPredicted RBP13.92□□□□□ -0.18
SDHA-218ENST00000515752 TMCO6Q96DC7 493 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 KCNS3Q9BQ31 491 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 KATNB1Q9BVA0 655 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 TNRC6BQ9UPQ9 1833 aaKnown RBP13.92□□□□□ -0.18
SDHA-218ENST00000515752 ASXL3Q9C0F0 2248 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 TRAV36DV7A0A075B6V5 113 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 BLOC1S5-TXNDC5H3BN57 136 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 PLPP2O43688 288 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 CPNE3O75131 537 aaKnown RBP13.92□□□□□ -0.18
SDHA-218ENST00000515752 SLC25A12O75746 678 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 NUDT14O95848 222 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 TXNDC12O95881 172 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 MST1P26927 711 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 CD79BP40259 229 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 POLR2HP52434 150 aaKnown RBP13.92□□□□□ -0.18
SDHA-218ENST00000515752 SLC25A1P53007 311 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 HSF2Q03933 536 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 TRIM61Q5EBN2 209 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 PHF19Q5T6S3 580 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 GPR139Q6DWJ6 353 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 FAAH2Q6GMR7 532 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 B3GLCTQ6Y288 498 aa13.92□□□□□ -0.18
SDHA-218ENST00000515752 PLEKHG7Q6ZR37 379 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms