RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 TECTAO75443 2155 aa2.41□□□□□ -2.02
LINC01088-211ENST00000515597 PLXNA1Q9UIW2 1896 aa2.41□□□□□ -2.02
LINC01088-211ENST00000515597 GTF3C1Q12789 2109 aa2.41□□□□□ -2.02
LINC01088-211ENST00000515597 TPRP12270 2363 aaKnown RBP2.41□□□□□ -2.02
LINC01088-211ENST00000515597 PLXNB2O15031 1838 aa2.4□□□□□ -2.02
LINC01088-211ENST00000515597 DMXL1Q9Y485 3027 aa2.4□□□□□ -2.02
LINC01088-211ENST00000515597 PTPRZ1P23471 2315 aaPredicted RBP2.4□□□□□ -2.02
LINC01088-211ENST00000515597 MGAMO43451 1857 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 IGHV1OR15-1A0A075B7D0 117 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 CCL15-CCL14A0A0B4J2E2 113 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 IGKV6-21A0A0C4DH24 114 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 TUBAL3A6NHL2 446 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 DUX1O43812 170 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 VPS26AO75436 327 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 IL9P15248 144 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 RPS12P25398 132 aaKnown RBP2.4□□□□□ -2.03
LINC01088-211ENST00000515597 CCND2P30279 289 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 NMT1P30419 496 aaKnown RBP2.4□□□□□ -2.03
LINC01088-211ENST00000515597 UGT1A5P35504 534 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 BTDP43251 543 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 RABIFP47224 123 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 CAV2P51636 162 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 LIM2P55344 173 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 KRTAP10-10P60014 251 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 TLE4Q04727 773 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 ATXN7L3Q14CW9 347 aaPredicted RBP2.4□□□□□ -2.03
LINC01088-211ENST00000515597 HERPUD1Q15011 391 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 CCL15Q16663 113 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 ADPRMQ3LIE5 342 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 LRRC8BQ6P9F7 803 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 ANKRD37Q7Z713 158 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 SKA3Q8IX90 412 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 OR52B4Q8NGK2 314 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 OPTNQ96CV9 577 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 AKR1E2Q96JD6 320 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 TXN2Q99757 166 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 C1orf21Q9H246 121 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 GLIPR2Q9H4G4 154 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 NGBQ9NPG2 151 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 RIMS3Q9UJD0 308 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 NAP1L2Q9ULW6 460 aaPredicted RBP2.4□□□□□ -2.03
LINC01088-211ENST00000515597 PLLPQ9Y342 182 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 IFT52Q9Y366 437 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 TRIOO75962 3097 aa2.4□□□□□ -2.03
LINC01088-211ENST00000515597 KMT2EQ8IZD2 1858 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 MAST2Q6P0Q8 1798 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 MYO9BQ13459 2157 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 TNNI3P19429 210 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 PAICSP22234 425 aaKnown RBP2.39□□□□□ -2.03
LINC01088-211ENST00000515597 PSMA2P25787 234 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 TNNT2P45379 298 aaPredicted RBP2.39□□□□□ -2.03
LINC01088-211ENST00000515597 PRMT2P55345 433 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 RIPPLY1Q0D2K3 151 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 EGFEM1PQ0D2K5 195 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 ST3GAL3Q11203 375 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 CEBPEQ15744 281 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 NDUFA9Q16795 377 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 NIPAL3Q6P499 406 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 WDR74Q6RFH5 385 aaPredicted RBP2.39□□□□□ -2.03
LINC01088-211ENST00000515597 ARCQ7LC44 396 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 APTXQ7Z2E3 356 aaKnown RBP2.39□□□□□ -2.03
LINC01088-211ENST00000515597 SYVN1Q86TM6 617 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 LCA5Q86VQ0 697 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 TMEM17Q86X19 198 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 C17orf82Q86X59 251 aaPredicted RBP2.39□□□□□ -2.03
LINC01088-211ENST00000515597 ZNF619Q8N2I2 560 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 CNNM3Q8NE01 707 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 CNIH3Q8TBE1 160 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 RAET1EQ8TD07 263 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 AENQ8WTP8 325 aaKnown RBP2.39□□□□□ -2.03
LINC01088-211ENST00000515597 DNAJA4Q8WW22 397 aaPredicted RBP2.39□□□□□ -2.03
LINC01088-211ENST00000515597 SLC5A11Q8WWX8 675 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 OR5B2Q96R09 309 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 DUSP16Q9BY84 665 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 GSDMCQ9BYG8 508 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 KRT23Q9C075 422 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 HSD3B7Q9H2F3 369 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 OR51J1Q9H342 316 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 APMAPQ9HDC9 416 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 PAK1IP1Q9NWT1 392 aaPredicted RBP2.39□□□□□ -2.03
LINC01088-211ENST00000515597 LCMT1Q9UIC8 334 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 CHMP2BQ9UQN3 213 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 MTCH2Q9Y6C9 303 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 PRRC2BQ5JSZ5 2229 aaKnown RBP2.39□□□□□ -2.03
LINC01088-211ENST00000515597 LRRC37AA6NMS7 1700 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 ASH1LQ9NR48 2969 aaKnown RBP2.39□□□□□ -2.03
LINC01088-211ENST00000515597 SPEGQ15772 3267 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 ACACBO00763 2458 aa2.39□□□□□ -2.03
LINC01088-211ENST00000515597 PSME4Q14997 1843 aa2.38□□□□□ -2.03
LINC01088-211ENST00000515597 A0A0G2JMZ2 1700 aa2.38□□□□□ -2.03
LINC01088-211ENST00000515597 LOC100131303A0A0U1RQF7 123 aa2.38□□□□□ -2.03
LINC01088-211ENST00000515597 MAST4O15021 2626 aa2.38□□□□□ -2.03
LINC01088-211ENST00000515597 EFNA2O43921 213 aa2.38□□□□□ -2.03
LINC01088-211ENST00000515597 PRPSAP2O60256 369 aa2.38□□□□□ -2.03
LINC01088-211ENST00000515597 JAK2O60674 1132 aa2.38□□□□□ -2.03
LINC01088-211ENST00000515597 FLNBO75369 2602 aaKnown RBP2.38□□□□□ -2.03
LINC01088-211ENST00000515597 TIMP1P01033 207 aa2.38□□□□□ -2.03
LINC01088-211ENST00000515597 FUT1P19526 365 aa2.38□□□□□ -2.03
LINC01088-211ENST00000515597 MAPK3P27361 379 aaPredicted RBP2.38□□□□□ -2.03
LINC01088-211ENST00000515597 HPDP32754 393 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms