RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 MMADHCQ9H3L0 296 aaPredicted RBP10.66□□□□□ -0.7
SNF8-215ENST00000515572 GP6Q9HCN6 339 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 ZNF629Q9UEG4 869 aaPredicted RBP10.66□□□□□ -0.7
SNF8-215ENST00000515572 Q9UFV3 132 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 RIMS3Q9UJD0 308 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 SLC7A7Q9UM01 511 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 RNF6Q9Y252 685 aa10.66□□□□□ -0.7
SNF8-215ENST00000515572 GSC2O15499 205 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 OR2T1O43869 369 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 AQP8O94778 261 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 IL18BPO95998 194 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 ITGA2P17301 1181 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 CTSSP25774 331 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 OPRM1P35372 400 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 AGFG1P52594 562 aaKnown RBP10.65□□□□□ -0.7
SNF8-215ENST00000515572 OR2B6P58173 313 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 ST3GAL3Q11203 375 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 PPP4R4Q6NUP7 873 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 PGM2L1Q6PCE3 622 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 TTC33Q6PID6 262 aaPredicted RBP10.65□□□□□ -0.7
SNF8-215ENST00000515572 GDF7Q7Z4P5 450 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 CYP4Z1Q86W10 505 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 MCEMP1Q8IX19 187 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 OFCC1Q8IZS5 231 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 OR6S1Q8NH40 331 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 LILRB4Q8NHJ6 448 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 MFSD8Q8NHS3 518 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 CA5BP1Q8WTZ4 195 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 CCDC124Q96CT7 223 aaKnown RBP10.65□□□□□ -0.7
SNF8-215ENST00000515572 GMPPAQ96IJ6 420 aaPredicted RBP10.65□□□□□ -0.7
SNF8-215ENST00000515572 CLPTM1LQ96KA5 538 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 TACO1Q9BSH4 297 aaKnown RBP10.65□□□□□ -0.7
SNF8-215ENST00000515572 NAA11Q9BSU3 229 aaPredicted RBP10.65□□□□□ -0.7
SNF8-215ENST00000515572 ZNF426Q9BUY5 554 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 SFXN3Q9BWM7 321 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 TAPBPLQ9BX59 468 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 SLC19A3Q9BZV2 496 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 AMBRA1Q9C0C7 1298 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.65□□□□□ -0.7
SNF8-215ENST00000515572 FAM32AQ9Y421 112 aaKnown RBP10.65□□□□□ -0.7
SNF8-215ENST00000515572 ENPP4Q9Y6X5 453 aa10.65□□□□□ -0.7
SNF8-215ENST00000515572 FASNP49327 2511 aaKnown RBP10.64□□□□□ -0.71
SNF8-215ENST00000515572 IGKV1D-42A0A075B6H8 117 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 TRAV36DV7A0A075B6V5 113 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 HTR3EA5X5Y0 456 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 LIPT2A6NK58 231 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 DVL2O14641 736 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 ACOT8O14734 319 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 SMAD9O15198 467 aaKnown RBP10.64□□□□□ -0.71
SNF8-215ENST00000515572 CYTIPO60759 359 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 LYPD3O95274 346 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 CLDN14O95500 239 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 PLGP00747 810 aaPredicted RBP10.64□□□□□ -0.71
SNF8-215ENST00000515572 THY1P04216 161 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 IMPDH2P12268 514 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 ATP6V1B2P21281 511 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 FPR1P21462 350 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 RBM34P42696 430 aaKnown RBP10.64□□□□□ -0.71
SNF8-215ENST00000515572 H3F3AP84243 136 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 MS4A2Q01362 244 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 EGR4Q05215 589 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 PIN1Q13526 163 aaPredicted RBP10.64□□□□□ -0.71
SNF8-215ENST00000515572 MFSD13AQ14CX5 517 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 SLC25A35Q3KQZ1 300 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 FAM69AQ5T7M9 428 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 PAQR6Q6TCH4 344 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 PLXDC2Q6UX71 529 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 CYP2R1Q6VVX0 501 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 FCRLAQ7L513 359 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 TSPYL5Q86VY4 417 aaPredicted RBP10.64□□□□□ -0.71
SNF8-215ENST00000515572 CCDC71Q8IV32 467 aaPredicted RBP10.64□□□□□ -0.71
SNF8-215ENST00000515572 GCNT2Q8N0V5 402 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 FAM86B1Q8N7N1 296 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 NAXEQ8NCW5 288 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 PIGXQ8TBF5 258 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 ROBO4Q8WZ75 1007 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 INTS12Q96CB8 462 aaKnown RBP10.64□□□□□ -0.71
SNF8-215ENST00000515572 KTI12Q96EK9 354 aaPredicted RBP10.64□□□□□ -0.71
SNF8-215ENST00000515572 HS6ST2Q96MM7 605 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 FNDC11Q9BVV2 318 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 CADM1Q9BY67 442 aaKnown RBP10.64□□□□□ -0.71
SNF8-215ENST00000515572 KLHL9Q9P2J3 617 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 A4GNTQ9UNA3 340 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 V9GYQ6 96 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 PCNX1Q96RV3 2341 aa10.64□□□□□ -0.71
SNF8-215ENST00000515572 INTS1Q8N201 2190 aaKnown RBP10.63□□□□□ -0.71
SNF8-215ENST00000515572 A0A1W2PNV4 684 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 AQP12BA6NM10 295 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 FZD7O75084 574 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 SS18L1O75177 396 aaPredicted RBP10.63□□□□□ -0.71
SNF8-215ENST00000515572 MT-ATP6P00846 226 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 IGF2P01344 180 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 SEMG1P04279 462 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 HOXB6P17509 224 aaKnown RBP10.63□□□□□ -0.71
SNF8-215ENST00000515572 RHCEP18577 417 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 GTF2E2P29084 291 aaKnown RBP10.63□□□□□ -0.71
SNF8-215ENST00000515572 RPS5P46782 204 aaKnown RBP10.63□□□□□ -0.71
SNF8-215ENST00000515572 CTBP2P56545 445 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 VLDLRP98155 873 aa10.63□□□□□ -0.71
SNF8-215ENST00000515572 TRAM2Q15035 370 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms