RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 CAMK2AQ9UQM7 478 aa18.85■□□□□ 0.61
LSM6-207ENST00000515311 A0A1W2PNR3 127 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 ARRDC5A6NEK1 342 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 B8ZZF3 427 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 FTCDNL1E5RQL4 147 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 H0Y3Z8 333 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 H0YC42 278 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 KPNA4O00629 521 aaPredicted RBP18.84■□□□□ 0.61
LSM6-207ENST00000515311 TNFSF11O14788 317 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 MT-ATP6P00846 226 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 PTNP21246 168 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 FPR1P21462 350 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 RPS5P46782 204 aaKnown RBP18.84■□□□□ 0.61
LSM6-207ENST00000515311 DIO1P49895 249 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 TPD52P55327 224 aaPredicted RBP18.84■□□□□ 0.61
LSM6-207ENST00000515311 RPS3AP61247 264 aaKnown RBP18.84■□□□□ 0.61
LSM6-207ENST00000515311 CSNK2A1P68400 391 aaPredicted RBP18.84■□□□□ 0.61
LSM6-207ENST00000515311 PRKCDQ05655 676 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 C19orf57Q0VDD7 668 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 RCN1Q15293 331 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 MICAQ29983 383 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 C1QL3Q5VWW1 255 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 HBMQ6B0K9 141 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 TBPL2Q6SJ96 375 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 PQLC1Q8N2U9 271 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 ZNF843Q8N446 348 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 OR10D3Q8NH80 312 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 PFN4Q8NHR9 129 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 FAM57AQ8TBR7 257 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 TAAR8Q969N4 342 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 BPIFA2Q96DR5 249 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 NRBF2Q96F24 287 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 DCLRE1BQ9H816 532 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 KRCC1Q9NPI7 259 aaPredicted RBP18.84■□□□□ 0.61
LSM6-207ENST00000515311 TIGARQ9NQ88 270 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 TMEM5Q9Y2B1 443 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 ZNF835Q9Y2P0 537 aa18.84■□□□□ 0.61
LSM6-207ENST00000515311 LIPT2A6NK58 231 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 ENO4A6NNW6 628 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 SULT2B1O00204 365 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 PIP5K1CO60331 668 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 CCNB2O95067 398 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 IMPDH2P12268 514 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 ABOP16442 354 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 IFNGR2P38484 337 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 ARHGDIAP52565 204 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 IST1P53990 364 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 CARD18P57730 90 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 RAC3P60763 192 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 SLC35A1P78382 337 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 LSM11P83369 360 aaKnown RBP eCLIP18.83■□□□□ 0.6
LSM6-207ENST00000515311 SRYQ05066 204 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 MFSD13AQ14CX5 517 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 C3AR1Q16581 482 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 SHQ1Q6PI26 577 aaKnown RBP18.83■□□□□ 0.6
LSM6-207ENST00000515311 AMIGO2Q86SJ2 522 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 LSRQ86X29 649 aaPredicted RBP18.83■□□□□ 0.6
LSM6-207ENST00000515311 PIGXQ8TBF5 258 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 ZPLD1Q8TCW7 415 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 PSD2Q9BQI7 771 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 C20orf141Q9NUB4 165 aa18.83■□□□□ 0.6
LSM6-207ENST00000515311 C6orf203Q9P0P8 240 aaPredicted RBP18.83■□□□□ 0.6
LSM6-207ENST00000515311 ZGRF1Q86YA3 2104 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 AHRRA9YTQ3 701 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 OR10H3O60404 316 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 SLC19A2O60779 497 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 C1QL1O75973 258 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 BGLAPP02818 100 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 IFI30P13284 250 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 EIF1AXP47813 144 aaKnown RBP18.82■□□□□ 0.6
LSM6-207ENST00000515311 PPP1R8Q12972 351 aaKnown RBP18.82■□□□□ 0.6
LSM6-207ENST00000515311 SF3B4Q15427 424 aaKnown RBP eCLIP18.82■□□□□ 0.6
LSM6-207ENST00000515311 ZNF74Q16587 644 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 GXYLT1Q4G148 440 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 ZNF770Q6IQ21 691 aaPredicted RBP18.82■□□□□ 0.6
LSM6-207ENST00000515311 Q6ZPB1 254 aaPredicted RBP18.82■□□□□ 0.6
LSM6-207ENST00000515311 TMPRSS11FQ6ZWK6 438 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 TMEM179BQ7Z7N9 219 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 CDK20Q8IZL9 346 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 SVOPLQ8N434 492 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 LIPHQ8WWY8 451 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 OSTF1Q92882 214 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 CPNE4Q96A23 557 aaPredicted RBP18.82■□□□□ 0.6
LSM6-207ENST00000515311 SGTBQ96EQ0 304 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 TAPBPLQ9BX59 468 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 FKRPQ9H9S5 495 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 PNPLA3Q9NST1 481 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 ALKBH4Q9NXW9 302 aa18.82■□□□□ 0.6
LSM6-207ENST00000515311 FIGNL2A6NMB9 653 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 PRRG2O14669 202 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 ZNHIT1O43257 154 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 CXCL13O43927 109 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 EIF1BO60739 113 aaKnown RBP18.81■□□□□ 0.6
LSM6-207ENST00000515311 WDR1O75083 606 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 PRB1P04280 392 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 TPOP07202 933 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 HOXD4P09016 255 aaPredicted RBP18.81■□□□□ 0.6
LSM6-207ENST00000515311 GABRA1P14867 456 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 ANPEPP15144 967 aa18.81■□□□□ 0.6
LSM6-207ENST00000515311 PTGER4P35408 488 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms