RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 CCDC173Q0VFZ6 552 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 LAGE3Q14657 143 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 GGTA1PQ4G0N0 100 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 TP53I3Q53FA7 332 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 LRRC8BQ6P9F7 803 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 ARMCX2Q7L311 632 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 C16orf62Q7Z3J2 963 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 C6orf120Q7Z4R8 191 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 TPRA1Q86W33 373 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 VRK2Q86Y07 508 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 GRAMD2AQ8IUY3 354 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 CLEC4FQ8N1N0 589 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 LRRC43Q8N309 656 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 OR52I1Q8NGK6 324 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 PAQR8Q8TEZ7 354 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 TCTEX1D2Q8WW35 142 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 TMEM158Q8WZ71 300 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 RPUSD4Q96CM3 377 aaKnown RBP1.33□□□□□ -2.2
NEDD4-211ENST00000514893 CELF6Q96J87 481 aaKnown RBP1.33□□□□□ -2.2
NEDD4-211ENST00000514893 C4orf36Q96KX1 117 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 PGLYRP4Q96LB8 373 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 TESK2Q96S53 571 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 TMEM117Q9H0C3 514 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 ECT2Q9H8V3 914 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 LIN28AQ9H9Z2 209 aaKnown RBP1.33□□□□□ -2.2
NEDD4-211ENST00000514893 CALHM2Q9HA72 323 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 SLC17A5Q9NRA2 495 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 POLE3Q9NRF9 147 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 FARSBQ9NSD9 589 aaKnown RBP1.33□□□□□ -2.2
NEDD4-211ENST00000514893 AATFQ9NY61 560 aaKnown RBP eCLIP1.33□□□□□ -2.2
NEDD4-211ENST00000514893 CGNQ9P2M7 1197 aaKnown RBP1.33□□□□□ -2.2
NEDD4-211ENST00000514893 GNG12Q9UBI6 72 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 SH3BGRL2Q9UJC5 107 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 RIMS3Q9UJD0 308 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 LAMP5Q9UJQ1 280 aa1.33□□□□□ -2.2
NEDD4-211ENST00000514893 ATP10DQ9P241 1426 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 GSAPA4D1B5 854 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 HELTA6NFD8 242 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 G3V4G9 280 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 CLDN5O00501 218 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 LAD1O00515 517 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 RGS16O15492 202 aaPredicted RBP1.32□□□□□ -2.2
NEDD4-211ENST00000514893 MBTPS2O43462 519 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 TNFSF13O75888 250 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 KIAA0754O94854 1291 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 GUCA1CO95843 209 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 UGT2B4P06133 528 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 HEXBP07686 556 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 BCKDHAP12694 445 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 MUC1P15941 1255 aaPredicted RBP1.32□□□□□ -2.2
NEDD4-211ENST00000514893 ABOP16442 354 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 COX7A1P24310 79 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 PSMA5P28066 241 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 OTX2P32243 289 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 CHI3L1P36222 383 aaPredicted RBP1.32□□□□□ -2.2
NEDD4-211ENST00000514893 HSPA2P54652 639 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 SNTB2Q13425 540 aaKnown RBP1.32□□□□□ -2.2
NEDD4-211ENST00000514893 LINC01620Q4KN68 170 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 LY6G6FQ5SQ64 297 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 LIPNQ5VXI9 398 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 CBLN3Q6UW01 205 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 TMEM184AQ6ZMB5 413 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 ACOT7LQ6ZUV0 252 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 GET4Q7L5D6 327 aaPredicted RBP1.32□□□□□ -2.2
NEDD4-211ENST00000514893 SERPINA9Q86WD7 417 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 KIR3DL3Q8N743 410 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 OR5L2Q8NGL0 311 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 RBMXL1Q96E39 390 aaKnown RBP1.32□□□□□ -2.2
NEDD4-211ENST00000514893 C12orf66Q96MD2 445 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 SECISBP2Q96T21 854 aaKnown RBP1.32□□□□□ -2.2
NEDD4-211ENST00000514893 TSG101Q99816 390 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 NRIP2Q9BQI9 281 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 RNF126Q9BV68 326 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 MAGT1Q9H0U3 335 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 IFI27L2Q9H2X8 130 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 PPDPFQ9H3Y8 114 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 RIBC2Q9H4K1 309 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 MEAF6Q9HAF1 191 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 ELOVL3Q9HB03 270 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 POLE4Q9NR33 117 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 SLC35D1Q9NTN3 355 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 HPF1Q9NWY4 346 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 GALPQ9UBC7 116 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 BTNL2Q9UIR0 455 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 B9D1Q9UPM9 204 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 RNF6Q9Y252 685 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 GSTK1Q9Y2Q3 226 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 OR10H1Q9Y4A9 318 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 MAP3K15Q6ZN16 1313 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 PLEKHH1Q9ULM0 1364 aa1.32□□□□□ -2.2
NEDD4-211ENST00000514893 LOC100131303A0A0U1RQF7 123 aa1.31□□□□□ -2.2
NEDD4-211ENST00000514893 A0A1B0GUS0 222 aa1.31□□□□□ -2.2
NEDD4-211ENST00000514893 METTL21EPA6NDL7 271 aa1.31□□□□□ -2.2
NEDD4-211ENST00000514893 RS1O15537 224 aa1.31□□□□□ -2.2
NEDD4-211ENST00000514893 CLDN3O15551 220 aa1.31□□□□□ -2.2
NEDD4-211ENST00000514893 TPST2O60704 377 aa1.31□□□□□ -2.2
NEDD4-211ENST00000514893 NOL3O60936 208 aaKnown RBP1.31□□□□□ -2.2
NEDD4-211ENST00000514893 BCAS1O75363 584 aaPredicted RBP1.31□□□□□ -2.2
NEDD4-211ENST00000514893 UGT2B17O75795 530 aa1.31□□□□□ -2.2
NEDD4-211ENST00000514893 NEBLO76041 1014 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms