RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 OR6M1Q8NGM8 313 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 C16orf78Q8WTQ4 265 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 SMIM4Q8WVI0 70 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 ELMO1Q92556 727 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 AP3S1Q92572 193 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 RAD51AP1Q96B01 352 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 NPAS1Q99742 590 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 OR52A5Q9H2C5 316 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 CA10Q9NS85 328 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 CES1P1Q9UKY3 287 aa6.81□□□□□ -1.32
CLIP1-205ENST00000514271 SLC9B1P1A6NJY1 282 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 NTN3O00634 580 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-205ENST00000514271 RNF13O43567 381 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 SIGLEC6O43699 453 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 SUSD5O60279 629 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 CD8AP01732 235 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 LPLP06858 475 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 PNLIPRP1P54315 467 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 CDK6Q00534 326 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 LINC00114Q6XXX2 140 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 UBE2R2Q712K3 238 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-205ENST00000514271 OR8H3Q8N146 312 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 CLDN19Q8N6F1 224 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 EID2Q8N6I1 236 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 SUN3Q8TAQ9 357 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 BRIX1Q8TDN6 353 aaKnown RBP6.8□□□□□ -1.32
CLIP1-205ENST00000514271 CXorf58Q96LI9 332 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 PITHD1Q9GZP4 211 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-205ENST00000514271 OR6C2Q9NZP2 312 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 SSR3Q9UNL2 185 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 TRAV14DV4A0A0A6YYC5 116 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 A0A1W2PPL8 197 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 IRGMA1A4Y4 181 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 PIPSLA2A3N6 862 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 ATP6V1G2-DDX39BF2Z307 99 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 INMT-MINDY4F8WBC2 141 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 BLOC1S5-TXNDC5H3BN57 136 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 FGF16O43320 207 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 AQP8O94778 261 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 ACP5P13686 325 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 MPZP25189 248 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 MAS1LP35410 378 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 PTH2RP49190 550 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 CAV3P56539 151 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 SPIBQ01892 262 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF85Q03923 595 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 HGFACQ04756 655 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF763Q0D2J5 394 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 KIR2DS3Q14952 304 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 HEPACAMQ14CZ8 416 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 C1orf185Q5T7R7 199 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 YOD1Q5VVQ6 348 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF660Q6AZW8 331 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-205ENST00000514271 GLDNQ6ZMI3 551 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-205ENST00000514271 RFLNAQ6ZTI6 216 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 PTCHD4Q6ZW05 846 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 RAB11FIP2Q7L804 512 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 ADCK2Q7Z695 626 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 OOSP2Q86WS3 158 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 ZNF547Q8IVP9 402 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 ARL14Q8N4G2 192 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 OR4D9Q8NGE8 314 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 IFI44Q8TCB0 444 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 METTL21AQ8WXB1 218 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 ZDHHC12Q96GR4 267 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 TEFMQ96QE5 360 aaKnown RBP6.8□□□□□ -1.32
CLIP1-205ENST00000514271 THAP7Q9BT49 309 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-205ENST00000514271 LRRN3Q9H3W5 708 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 DNAJC11Q9NVH1 559 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 CPNE7Q9UBL6 633 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 CYB5R1Q9UHQ9 305 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 HSPB11Q9Y547 144 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 SNRNP200O75643 2136 aaKnown RBP6.8□□□□□ -1.32
CLIP1-205ENST00000514271 A0A1W2PPH5 198 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 SYT5O00445 386 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 SNAPINO95295 136 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 PROS1P07225 676 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 ANXA5P08758 320 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 UCHL1P09936 223 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 HLA-GP17693 338 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 POU3F2P20265 443 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-205ENST00000514271 DDCP20711 480 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 NOVA1P51513 510 aaKnown RBP6.8□□□□□ -1.32
CLIP1-205ENST00000514271 LTB4RQ15722 352 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 RPE65Q16518 533 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 TYW3Q6IPR3 259 aaKnown RBP6.8□□□□□ -1.32
CLIP1-205ENST00000514271 ARMC6Q6NXE6 501 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 TMPRSS7Q7RTY8 843 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 OR5K2Q8NHB8 316 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 THEM6Q8WUY1 208 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 ST8SIA4Q92187 359 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 PRRC1Q96M27 445 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 SLC38A3Q99624 504 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 SLC35A5Q9BS91 424 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 SCRT1Q9BWW7 348 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 EBPLQ9BY08 206 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 POLR2J2Q9GZM3 115 aaKnown RBP6.8□□□□□ -1.32
CLIP1-205ENST00000514271 ABCG5Q9H222 651 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 OR51J1Q9H342 316 aa6.8□□□□□ -1.32
CLIP1-205ENST00000514271 EQTNQ9NQ60 294 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms