RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 NTF4P34130 210 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 PPOXP50336 477 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 DVL1P1P54792 670 aaPredicted RBP12.13□□□□□ -0.47
SPCS3-204ENST00000513139 RPL38P63173 70 aaKnown RBP12.13□□□□□ -0.47
SPCS3-204ENST00000513139 SLC9B1Q4ZJI4 515 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 ATP6AP1LQ52LC2 224 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 SYT14P1Q58G82 188 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.13□□□□□ -0.47
SPCS3-204ENST00000513139 ANKS4BQ8N8V4 417 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 PIGXQ8TBF5 258 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 FAM216AQ8WUB2 273 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 JADE3Q92613 823 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 CDS1Q92903 461 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 GCDHQ92947 438 aaPredicted RBP12.13□□□□□ -0.47
SPCS3-204ENST00000513139 PPCDCQ96CD2 204 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 ZHX1-C8orf76Q96EF9 292 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 PPP3R2Q96LZ3 170 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 CCT7Q99832 543 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 C1orf50Q9BV19 199 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 RAB1BQ9H0U4 201 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 MEAF6Q9HAF1 191 aa12.13□□□□□ -0.47
SPCS3-204ENST00000513139 EDF1O60869 148 aaKnown RBP12.12□□□□□ -0.47
SPCS3-204ENST00000513139 WNT11O96014 354 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 HMGN2P05204 90 aaKnown RBP12.12□□□□□ -0.47
SPCS3-204ENST00000513139 VIMP08670 466 aaKnown RBP12.12□□□□□ -0.47
SPCS3-204ENST00000513139 BCKDHAP12694 445 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 PAX7P23759 505 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 IL2RGP31785 369 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 IDH3GP51553 393 aaPredicted RBP12.12□□□□□ -0.47
SPCS3-204ENST00000513139 FOXG1P55316 489 aaPredicted RBP12.12□□□□□ -0.47
SPCS3-204ENST00000513139 PRPS1P60891 318 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 SLC25A3Q00325 362 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 SF3A3Q12874 501 aaKnown RBP eCLIP12.12□□□□□ -0.47
SPCS3-204ENST00000513139 PDE7AQ13946 482 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 EFNB3Q15768 340 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 NDUFAF6Q330K2 333 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 ZNF385BQ569K4 471 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 ANKRD26P1Q6NSI1 321 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 LIAT1Q6ZQX7 453 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 HOMEZQ8IX15 550 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 LRRC34Q8IZ02 419 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 KIRREL3Q8IZU9 778 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 TMCO5AQ8N6Q1 288 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 FNDC5Q8NAU1 212 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 CLHC1Q8NHS4 586 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 TMEM234Q8WY98 164 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 FAM120BQ96EK7 910 aaKnown RBP12.12□□□□□ -0.47
SPCS3-204ENST00000513139 OTUB1Q96FW1 271 aaPredicted RBP12.12□□□□□ -0.47
SPCS3-204ENST00000513139 BOD1Q96IK1 185 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 FCRL1Q96LA6 429 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 SAP130Q9H0E3 1048 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 PLK3Q9H4B4 646 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 REEP4Q9H6H4 257 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 CA10Q9NS85 328 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 PARPBPQ9NWS1 579 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 PCDHB14Q9Y5E9 798 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 WNK2Q9Y3S1 2297 aa12.12□□□□□ -0.47
SPCS3-204ENST00000513139 TRRAPQ9Y4A5 3859 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 TRPC5OSA6NMA1 111 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 PMS2P2O95744 297 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 UBL4AP11441 157 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 SDC1P18827 310 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 FKBP2P26885 142 aaKnown RBP12.11□□□□□ -0.47
SPCS3-204ENST00000513139 KHKP50053 298 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 IDH3AP50213 366 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 AQP5P55064 265 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 SESN3P58005 492 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 LASP1Q14847 261 aaKnown RBP12.11□□□□□ -0.47
SPCS3-204ENST00000513139 PDLIM3Q53GG5 364 aaPredicted RBP12.11□□□□□ -0.47
SPCS3-204ENST00000513139 PRR31Q5SQ13 230 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 DCST2Q5T1A1 773 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 IL23RQ5VWK5 629 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 NXNQ6DKJ4 435 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 CDC73Q6P1J9 531 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 KLHL24Q6TFL4 600 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 EPGNQ6UW88 154 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 OR52E4Q8NGH9 312 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 RFWD2Q8NHY2 731 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 ZNF418Q8TF45 676 aaPredicted RBP12.11□□□□□ -0.47
SPCS3-204ENST00000513139 NEU4Q8WWR8 484 aaPredicted RBP12.11□□□□□ -0.47
SPCS3-204ENST00000513139 CHMP6Q96FZ7 201 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 TSSK3Q96PN8 268 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 OR52B2Q96RD2 323 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 ACTRT3Q9BYD9 372 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 LAT2Q9GZY6 243 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 QRSL1Q9H0R6 528 aaKnown RBP12.11□□□□□ -0.47
SPCS3-204ENST00000513139 CCDC134Q9H6E4 229 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 METTL17Q9H7H0 456 aaPredicted RBP12.11□□□□□ -0.47
SPCS3-204ENST00000513139 OBP2BQ9NPH6 170 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 ZCCHC3Q9NUD5 404 aaKnown RBP12.11□□□□□ -0.47
SPCS3-204ENST00000513139 FGFR1OP2Q9NVK5 253 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 SH3BP4Q9P0V3 963 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 UPB1Q9UBR1 384 aa12.11□□□□□ -0.47
SPCS3-204ENST00000513139 B4DSR2 109 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 AKAP10O43572 662 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 ERCC1P07992 297 aaPredicted RBP12.1□□□□□ -0.47
SPCS3-204ENST00000513139 KRT16P08779 473 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 DAOP14920 347 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 LBPP18428 481 aa12.1□□□□□ -0.47
SPCS3-204ENST00000513139 MPGP29372 298 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms