RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SLC22A20A6NK97 555 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 OR4A8P0C604 315 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 DHODHQ02127 395 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 APOFQ13790 326 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 B3GNTL1Q67FW5 361 aaPredicted RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 ANKRD16Q6P6B7 361 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 HS3ST5Q8IZT8 346 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 BCORP1Q8N888 145 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 OR1E3Q8WZA6 343 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 CD93Q9NPY3 652 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 SHROOM2Q13796 1616 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 A0A0D9SEW6 157 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 HIDE1A8MVS5 230 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 DNAJB6O75190 326 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 CD44P16070 742 aaKnown RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 BRS3P32247 399 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 IRAK1P51617 712 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 DUSP2Q05923 314 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 LTB4RQ15722 352 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 UGT8Q16880 541 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 ARL13AQ5H913 290 aaPredicted RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 LYRM7Q5U5X0 104 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 RTL10Q7L3V2 364 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 RPS19BP1Q86WX3 136 aaKnown RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 CDRT4Q8N9R6 151 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 HCFC1R1Q9NWW0 138 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 PAQR5Q9NXK6 330 aaPredicted RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 EBF1Q9UH73 591 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 SLC22A23A1A5C7 686 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 OR52A4PA6NMU1 304 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 UBE2L6O14933 153 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 PIAS1O75925 651 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 CST3P01034 146 aaPredicted RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 EGFP01133 1207 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 ABHD2P08910 425 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 BMP5P22003 454 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 EIF1P41567 113 aaKnown RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 TAS2R31P59538 309 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 OLFML1Q6UWY5 402 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.33□□□□□ -1.08
VCAN-208ENST00000512590 GPR150Q8NGU9 434 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 UTP4Q969X6 686 aaKnown RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 EMC7Q9NPA0 242 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 TAS2R3Q9NYW6 316 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 AMMECR1Q9Y4X0 333 aaPredicted RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 SULT1C2O00338 296 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 SPRY3O43610 288 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 ORM1P02763 201 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 PEX2P28328 305 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 PYCR1P32322 319 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 MPLP40238 635 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 CDC34P49427 236 aaPredicted RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 DEFB103AP81534 67 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 MS4A2Q01362 244 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 EXOSC2Q13868 293 aaKnown RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 FAHD2BQ6P2I3 314 aaPredicted RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 TSSK4Q6SA08 328 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 SAMD12Q8N8I0 201 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 OR4A4PQ8NGN8 299 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 FAHD2AQ96GK7 314 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 DUSP9Q99956 384 aaKnown RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 SLC7A8Q9UHI5 535 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 SMIM30A4D0T7 59 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 CCL21O00585 134 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 KLF11O14901 512 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 LDB3O75112 727 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 MT-CO3P00414 261 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 MYF5P13349 255 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 PVRP15151 417 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 ACTBP60709 375 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 CTBSQ01459 385 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 NRN1LQ496H8 165 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 TMEM244Q5VVB8 128 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 RANBP10Q6VN20 620 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 YRDCQ86U90 279 aaKnown RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 GLB1L2Q8IW92 636 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 C17orf78Q8N4C9 275 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 BHLHE23Q8NDY6 225 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 SLC41A3Q96GZ6 507 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 TSNAXQ99598 290 aaKnown RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 ANKRD19PQ9H560 264 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 WRAP73Q9P2S5 460 aaPredicted RBP8.33□□□□□ -1.08
VCAN-208ENST00000512590 NFS1Q9Y697 457 aa8.33□□□□□ -1.08
VCAN-208ENST00000512590 IQGAP3Q86VI3 1631 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 TRAV6A0A075B6T7 132 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 KDM4EB2RXH2 506 aaPredicted RBP8.32□□□□□ -1.08
VCAN-208ENST00000512590 SULT1C4O75897 302 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 ATP6V1G2O95670 118 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 CD1BP29016 333 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 TMPRSS3P57727 454 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 MAT1AQ00266 395 aaKnown RBP8.32□□□□□ -1.08
VCAN-208ENST00000512590 AGERQ15109 404 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 H2BFWTQ7Z2G1 175 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 OR11G2Q8NGC1 345 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 ZCCHC14Q8WYQ9 949 aaKnown RBP8.32□□□□□ -1.08
VCAN-208ENST00000512590 COMMD5Q9GZQ3 224 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 LINC00597Q9H2U6 94 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 TMEM231Q9H6L2 316 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 TRAPPC13A5PLN9 417 aa8.32□□□□□ -1.08
VCAN-208ENST00000512590 PRAMEF25A6NGN4 478 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms