RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 SURF4O15260 269 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 TOX3O15405 576 aaPredicted RBP8.71□□□□□ -1.02
MSH3-203ENST00000512531 TBX1O43435 398 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 OR2B3O76000 313 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 IL1AP01583 271 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 HLA-DPB1P04440 258 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 FAM87AP0C7U9 286 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 PRR23D2P0DMB1 279 aaPredicted RBP8.71□□□□□ -1.02
MSH3-203ENST00000512531 PNMTP11086 282 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 CPEP16870 476 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 GALP22466 123 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 SLC6A8P48029 635 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 RFX3P48380 749 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 CTBP2P56545 445 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 BDH1Q02338 343 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 GPR50Q13585 617 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 ZNF267Q14586 743 aaPredicted RBP8.71□□□□□ -1.02
MSH3-203ENST00000512531 ZNF141Q15928 474 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.71□□□□□ -1.02
MSH3-203ENST00000512531 ALG10BQ5I7T1 473 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 Q6ZNX1 250 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 MED25Q71SY5 747 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 CXXC5Q7LFL8 322 aaKnown RBP8.71□□□□□ -1.02
MSH3-203ENST00000512531 ZNF761Q86XN6 746 aaPredicted RBP8.71□□□□□ -1.02
MSH3-203ENST00000512531 IQCF1Q8N6M8 205 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 LSMEM1Q8N8F7 131 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 OR5T3Q8NGG3 340 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 OR52N1Q8NH53 320 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 OR51Q1Q8NH59 317 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 ZNF417Q8TAU3 575 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 SLC2A12Q8TD20 617 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 HAVCR2Q8TDQ0 301 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 UBASH3BQ8TF42 649 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 BPIFA2Q96DR5 249 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 TAAR9Q96RI9 348 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 ZNF587Q96SQ5 575 aaPredicted RBP8.71□□□□□ -1.02
MSH3-203ENST00000512531 CCDC32Q9BV29 185 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 DDA1Q9BW61 102 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 IFT27Q9BW83 186 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 JAM3Q9BX67 310 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 SLC19A3Q9BZV2 496 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 OR10A5Q9H207 317 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 ZBTB20Q9HC78 741 aaPredicted RBP8.71□□□□□ -1.02
MSH3-203ENST00000512531 SIDT1Q9NXL6 827 aaKnown RBP8.71□□□□□ -1.02
MSH3-203ENST00000512531 GALNT8Q9NY28 637 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 CNIH4Q9P003 139 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 HCN3Q9P1Z3 774 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 LRIT1Q9P2V4 623 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 TNFRSF10DQ9UBN6 386 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 CBLCQ9ULV8 474 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 SRPK3Q9UPE1 567 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 UGT2A1Q9Y4X1 527 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 CLCA3PQ9Y6N3 262 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 RNF215Q9Y6U7 377 aa8.71□□□□□ -1.02
MSH3-203ENST00000512531 SCN3AQ9NY46 2000 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 CLEC18AA5D8T8 446 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 OR6C76A6NM76 312 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 PYCARD-AS1I3L0S3 204 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 FRS3O43559 492 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 IDH3BO43837 385 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 SEMA7AO75326 666 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 SNX4O95219 450 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 EPPINO95925 133 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 CBX7O95931 251 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 CSTAP01040 98 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 TP53P04637 393 aaPredicted RBP8.7□□□□□ -1.02
MSH3-203ENST00000512531 CD53P19397 219 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 FBLP22087 321 aaKnown RBP8.7□□□□□ -1.02
MSH3-203ENST00000512531 GABRA5P31644 462 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 PTGER1P34995 402 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 MAP3K8P41279 467 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 GPR4P46093 362 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 PGDP52209 483 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 ACSM1Q08AH1 577 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 MGAT2Q10469 447 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 FUT7Q11130 342 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 FGFBP1Q14512 234 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 EXOSC7Q15024 291 aaKnown RBP8.7□□□□□ -1.02
MSH3-203ENST00000512531 DEFB110Q30KQ9 67 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 CLEC12AQ5QGZ9 265 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 CCNJQ5T5M9 372 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 ACSM5Q6NUN0 579 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 MZT2AQ6P582 158 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 CLEC18BQ6UXF7 455 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 QSOX2Q6ZRP7 698 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 ZNF554Q86TJ5 538 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 OAFQ86UD1 273 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 IGFN1Q86VF2 1251 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 WFDC8Q8IUA0 241 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 NKAIN4Q8IVV8 208 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 POGLUT1Q8NBL1 392 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 CLEC18CQ8NCF0 446 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 OR14A16Q8NHC5 309 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 TMEM255BQ8WV15 326 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 OTULINQ96BN8 352 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 HSPBAP1Q96EW2 488 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 RHNO1Q9BSD3 238 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 MED18Q9BUE0 208 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 TAPBPLQ9BX59 468 aa8.7□□□□□ -1.02
MSH3-203ENST00000512531 ASPNQ9BXN1 380 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms