RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 QRSL1Q9H0R6 528 aaKnown RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 LPAR2Q9HBW0 351 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 DYNLRB1Q9NP97 96 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 ESM1Q9NQ30 184 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 ACSS1Q9NUB1 689 aaPredicted RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 TMEM45AQ9NWC5 275 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 MKS1Q9NXB0 559 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 CRNNQ9UBG3 495 aaPredicted RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 TRAPPC4Q9Y296 219 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 POLR3HQ9Y535 204 aaPredicted RBP10.01□□□□□ -0.81
RNF4-216ENST00000511859 TIMM22Q9Y584 194 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 PTGDR2Q9Y5Y4 395 aa10.01□□□□□ -0.81
RNF4-216ENST00000511859 LOC105371242A0A075B767 164 aa10□□□□□ -0.81
RNF4-216ENST00000511859 TMEM129A0AVI4 362 aa10□□□□□ -0.81
RNF4-216ENST00000511859 TMEM120BA0PK00 339 aa10□□□□□ -0.81
RNF4-216ENST00000511859 SH3PXD2BA1X283 911 aa10□□□□□ -0.81
RNF4-216ENST00000511859 WDR91A4D1P6 747 aa10□□□□□ -0.81
RNF4-216ENST00000511859 NPIPB9F8W1W9 429 aa10□□□□□ -0.81
RNF4-216ENST00000511859 LYNX1G3V0Z9 82 aa10□□□□□ -0.81
RNF4-216ENST00000511859 EIF1BO60739 113 aaKnown RBP10□□□□□ -0.81
RNF4-216ENST00000511859 TBX19O60806 448 aa10□□□□□ -0.81
RNF4-216ENST00000511859 AVPP01185 164 aa10□□□□□ -0.81
RNF4-216ENST00000511859 HMGN2P05204 90 aaKnown RBP10□□□□□ -0.81
RNF4-216ENST00000511859 LYNX1P0DP58 116 aa10□□□□□ -0.81
RNF4-216ENST00000511859 SAGP10523 405 aaPredicted RBP10□□□□□ -0.81
RNF4-216ENST00000511859 UBL4AP11441 157 aa10□□□□□ -0.81
RNF4-216ENST00000511859 ATP5F1P24539 256 aaPredicted RBP10□□□□□ -0.81
RNF4-216ENST00000511859 FPR2P25090 351 aa10□□□□□ -0.81
RNF4-216ENST00000511859 THBS4P35443 961 aa10□□□□□ -0.81
RNF4-216ENST00000511859 FRKP42685 505 aaPredicted RBP10□□□□□ -0.81
RNF4-216ENST00000511859 TMEM33P57088 247 aa10□□□□□ -0.81
RNF4-216ENST00000511859 MYBPC1Q00872 1141 aa10□□□□□ -0.81
RNF4-216ENST00000511859 IL1RL1Q01638 556 aa10□□□□□ -0.81
RNF4-216ENST00000511859 PCLAFQ15004 111 aa10□□□□□ -0.81
RNF4-216ENST00000511859 IMPG1Q17R60 797 aa10□□□□□ -0.81
RNF4-216ENST00000511859 NDUFAF6Q330K2 333 aa10□□□□□ -0.81
RNF4-216ENST00000511859 SLC9B1Q4ZJI4 515 aa10□□□□□ -0.81
RNF4-216ENST00000511859 HIKESHIQ53FT3 197 aa10□□□□□ -0.81
RNF4-216ENST00000511859 ZYG11AQ6WRX3 759 aa10□□□□□ -0.81
RNF4-216ENST00000511859 SPATA21Q7Z572 469 aa10□□□□□ -0.81
RNF4-216ENST00000511859 C1QL2Q7Z5L3 287 aa10□□□□□ -0.81
RNF4-216ENST00000511859 C10orf107Q8IVU9 208 aa10□□□□□ -0.81
RNF4-216ENST00000511859 CCNYL1Q8N7R7 359 aa10□□□□□ -0.81
RNF4-216ENST00000511859 ZNF614Q8N883 585 aa10□□□□□ -0.81
RNF4-216ENST00000511859 FAM169BQ8N8A8 192 aa10□□□□□ -0.81
RNF4-216ENST00000511859 NANPQ8TBE9 248 aa10□□□□□ -0.81
RNF4-216ENST00000511859 CDS1Q92903 461 aa10□□□□□ -0.81
RNF4-216ENST00000511859 OTUB1Q96FW1 271 aaPredicted RBP10□□□□□ -0.81
RNF4-216ENST00000511859 CHMP6Q96FZ7 201 aa10□□□□□ -0.81
RNF4-216ENST00000511859 METTL2AQ96IZ6 378 aaKnown RBP10□□□□□ -0.81
RNF4-216ENST00000511859 EGLN2Q96KS0 407 aa10□□□□□ -0.81
RNF4-216ENST00000511859 ZNF317Q96PQ6 595 aaPredicted RBP10□□□□□ -0.81
RNF4-216ENST00000511859 SLC6A7Q99884 636 aa10□□□□□ -0.81
RNF4-216ENST00000511859 SLITRK2Q9H156 845 aa10□□□□□ -0.81
RNF4-216ENST00000511859 G6PC2Q9NQR9 355 aa10□□□□□ -0.81
RNF4-216ENST00000511859 ACER3Q9NUN7 267 aa10□□□□□ -0.81
RNF4-216ENST00000511859 FLVCR1Q9Y5Y0 555 aa10□□□□□ -0.81
RNF4-216ENST00000511859 HMGB1P1B2RPK0 211 aaPredicted RBP9.99□□□□□ -0.81
RNF4-216ENST00000511859 ANKRD28O15084 1053 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 RSL1D1O76021 490 aaKnown RBP9.99□□□□□ -0.81
RNF4-216ENST00000511859 ADRA2AP08913 450 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 HOXB1P14653 301 aaPredicted RBP9.99□□□□□ -0.81
RNF4-216ENST00000511859 CDH2P19022 906 aaPredicted RBP9.99□□□□□ -0.81
RNF4-216ENST00000511859 IMPDH1P20839 514 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 ACHEP22303 614 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 ALDH3A1P30838 453 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 RNF144AP50876 292 aaPredicted RBP9.99□□□□□ -0.81
RNF4-216ENST00000511859 UBE2NP61088 152 aaKnown RBP9.99□□□□□ -0.81
RNF4-216ENST00000511859 LASP1Q14847 261 aaKnown RBP9.99□□□□□ -0.81
RNF4-216ENST00000511859 DCST2Q5T1A1 773 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 CDC73Q6P1J9 531 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 ZCCHC23Q6ZST2 131 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 TRIM46Q7Z4K8 759 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 ADAMTS15Q8TE58 950 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 CKAP2Q8WWK9 683 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 FAM120BQ96EK7 910 aaKnown RBP9.99□□□□□ -0.81
RNF4-216ENST00000511859 MS4A3Q96HJ5 214 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 TMEM237Q96Q45 408 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 NAA11Q9BSU3 229 aaPredicted RBP9.99□□□□□ -0.81
RNF4-216ENST00000511859 MS4A5Q9H3V2 200 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 UNKLQ9H9P5 680 aaKnown RBP9.99□□□□□ -0.81
RNF4-216ENST00000511859 SSU72Q9NP77 194 aaKnown RBP9.99□□□□□ -0.81
RNF4-216ENST00000511859 TREM2Q9NZC2 230 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 SH3BP4Q9P0V3 963 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 CHRNA9Q9UGM1 479 aa9.99□□□□□ -0.81
RNF4-216ENST00000511859 ARPC4-TTLL3A0A0A6YYG9 625 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 A0A0G2JMP0 313 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 A0A0X1KG70 313 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 H3BQF6 201 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 J3QLI3 93 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 IGLV1-44P01699 117 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 IGFBP1P08833 259 aaPredicted RBP9.98□□□□□ -0.81
RNF4-216ENST00000511859 CECR9P0C854 216 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 CALCRP30988 508 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 EVX1P49640 407 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 OR2B6P58173 313 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 LMO4P61968 165 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 SLC35A1P78382 337 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 IL13RA1P78552 427 aa9.98□□□□□ -0.81
RNF4-216ENST00000511859 HGFACQ04756 655 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms