RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 DUSP7Q16829 419 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 KLF17Q5JT82 389 aaPredicted RBP2.21□□□□□ -2.06
CHD1-207ENST00000511628 PHYHD1Q5SRE7 291 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 OR2A2Q6IF42 318 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 TFAP2EQ6VUC0 442 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 DNM1P46Q6ZS02 220 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 PGAP1Q75T13 922 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 TRIM69Q86WT6 500 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 C6orf223Q8N319 242 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 TMEM252Q8N6L7 170 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 ALLCQ8N6M5 410 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 OR2L5Q8NG80 312 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 OR4K14Q8NGD5 310 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 MAGEE2Q8TD90 523 aaPredicted RBP2.21□□□□□ -2.06
CHD1-207ENST00000511628 TCTEX1D2Q8WW35 142 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 ST8SIA1Q92185 356 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 MRPS31Q92665 395 aaKnown RBP2.21□□□□□ -2.06
CHD1-207ENST00000511628 UBE2E3Q969T4 207 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 EFHD2Q96C19 240 aaPredicted RBP2.21□□□□□ -2.06
CHD1-207ENST00000511628 RPUSD4Q96CM3 377 aaKnown RBP2.21□□□□□ -2.06
CHD1-207ENST00000511628 FAM122AQ96E09 287 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 NUS1Q96E22 293 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 C16orf74Q96GX8 76 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 C12orf42Q96LP6 360 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 RBM14Q96PK6 669 aaKnown RBP2.21□□□□□ -2.06
CHD1-207ENST00000511628 COPS8Q99627 209 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 TRIM62Q9BVG3 475 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 ROPN1BQ9BZX4 212 aaPredicted RBP2.21□□□□□ -2.06
CHD1-207ENST00000511628 OR51J1Q9H342 316 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 EHD1Q9H4M9 534 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 NUDT15Q9NV35 164 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 C6orf203Q9P0P8 240 aaPredicted RBP2.21□□□□□ -2.06
CHD1-207ENST00000511628 ZNF639Q9UID6 485 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 PIGLQ9Y2B2 252 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 RRP15Q9Y3B9 282 aaKnown RBP2.21□□□□□ -2.06
CHD1-207ENST00000511628 UGT2A1Q9Y4X1 527 aa2.21□□□□□ -2.06
CHD1-207ENST00000511628 COL16A1Q07092 1604 aaPredicted RBP2.2□□□□□ -2.06
CHD1-207ENST00000511628 A0A0G2JLM5 398 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 TCRBV9S1A1TA0A576 114 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 FAM231BA6NCW3 169 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 TRIM64CA6NLI5 447 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 HSD17B6O14756 317 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 SCGNO76038 276 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 TSPAN12O95859 305 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 DBTP11182 482 aaKnown RBP2.2□□□□□ -2.06
CHD1-207ENST00000511628 CCDC130P13994 396 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 ETS2P15036 469 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 CD1EP15812 388 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 NTSP30990 170 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 DDOSTP39656 456 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 BTDP43251 543 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 GSSP48637 474 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 KLK7P49862 253 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 CHRNB3Q05901 458 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 NCBP1Q09161 790 aaKnown RBP2.2□□□□□ -2.06
CHD1-207ENST00000511628 ZNF763Q0D2J5 394 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 PLD1Q13393 1074 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 DDX39BQ13838 428 aaKnown RBP2.2□□□□□ -2.06
CHD1-207ENST00000511628 HERPUD1Q15011 391 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 DPYSL2Q16555 572 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 KYAT1Q16773 422 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 CFAP221Q4G0U5 840 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 BOLA3Q53S33 107 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 OR52E8Q6IFG1 317 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 WDR74Q6RFH5 385 aaPredicted RBP2.2□□□□□ -2.06
CHD1-207ENST00000511628 ENPP6Q6UWR7 440 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 PRSS41Q7RTY9 318 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 TMEM179BQ7Z7N9 219 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 SDR9C7Q8NEX9 313 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 BBS1Q8NFJ9 593 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 C7orf33Q8WU49 177 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 DNAJA4Q8WW22 397 aaPredicted RBP2.2□□□□□ -2.06
CHD1-207ENST00000511628 MAIP1Q8WWC4 291 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 HTR3CQ8WXA8 447 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 N4BP2L2Q92802 583 aaPredicted RBP2.2□□□□□ -2.06
CHD1-207ENST00000511628 FBXO32Q969P5 355 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 RPRD1AQ96P16 312 aaPredicted RBP2.2□□□□□ -2.06
CHD1-207ENST00000511628 MRPL45Q9BRJ2 306 aaKnown RBP2.2□□□□□ -2.06
CHD1-207ENST00000511628 RBKSQ9H477 322 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 RNF167Q9H6Y7 350 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 METTL7AQ9H8H3 244 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 ISG20L2Q9H9L3 353 aaKnown RBP2.2□□□□□ -2.06
CHD1-207ENST00000511628 MARCH5Q9NX47 278 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 COX16Q9P0S2 106 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 KIF25Q9UIL4 384 aa2.2□□□□□ -2.06
CHD1-207ENST00000511628 PHF3Q92576 2039 aaKnown RBP2.19□□□□□ -2.06
CHD1-207ENST00000511628 KIR2DL5BA0A0G2JN68 375 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 KIR2DL5BA0A0G2JPC4 375 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 A0A0J9YXY3 114 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 A0A1W2PPE3 182 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 A0A1W2PPV9 198 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 HELTA6NFD8 242 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 A6NIZ1 184 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 OR52A4PA6NMU1 304 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 POLR2DO15514 142 aaKnown RBP2.19□□□□□ -2.06
CHD1-207ENST00000511628 MED7O43513 233 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 HCRTR1O43613 425 aa2.19□□□□□ -2.06
CHD1-207ENST00000511628 ZNF780AO75290 641 aaPredicted RBP2.19□□□□□ -2.06
CHD1-207ENST00000511628 OXSR1O95747 527 aaPredicted RBP2.19□□□□□ -2.06
CHD1-207ENST00000511628 HSMCR30P0CW71 290 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms