RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 C18orf12Q96KH6 178 aa20.28■□□□□ 0.84
SNF8-209ENST00000510558 GSX2Q9BZM3 304 aa20.28■□□□□ 0.84
SNF8-209ENST00000510558 SLC52A3Q9NQ40 469 aa20.28■□□□□ 0.84
SNF8-209ENST00000510558 SLAMF8Q9P0V8 285 aa20.28■□□□□ 0.84
SNF8-209ENST00000510558 NCF2P19878 526 aaPredicted RBP20.27■□□□□ 0.84
SNF8-209ENST00000510558 ADSLP30566 484 aaPredicted RBP20.27■□□□□ 0.84
SNF8-209ENST00000510558 PTH2RP49190 550 aa20.27■□□□□ 0.84
SNF8-209ENST00000510558 ATP4BP51164 291 aa20.27■□□□□ 0.84
SNF8-209ENST00000510558 ZNF311Q5JNZ3 666 aa20.27■□□□□ 0.84
SNF8-209ENST00000510558 PAGE3Q5JUK9 113 aa20.27■□□□□ 0.84
SNF8-209ENST00000510558 TIMM23BQ5SRD1 257 aa20.27■□□□□ 0.84
SNF8-209ENST00000510558 ADAM5Q6NVV9 412 aa20.27■□□□□ 0.84
SNF8-209ENST00000510558 PRSS57Q6UWY2 283 aa20.27■□□□□ 0.84
SNF8-209ENST00000510558 YTHDF3Q7Z739 585 aaKnown RBP20.27■□□□□ 0.84
SNF8-209ENST00000510558 SERPINA11Q86U17 422 aa20.27■□□□□ 0.84
SNF8-209ENST00000510558 LILRB1Q8NHL6 650 aaPredicted RBP20.27■□□□□ 0.84
SNF8-209ENST00000510558 MUCL1Q96DR8 90 aa20.27■□□□□ 0.84
SNF8-209ENST00000510558 VIPAS39Q9H9C1 493 aa20.27■□□□□ 0.84
SNF8-209ENST00000510558 ARGLU1Q9NWB6 273 aaPredicted RBP20.27■□□□□ 0.84
SNF8-209ENST00000510558 FLVCR1Q9Y5Y0 555 aa20.27■□□□□ 0.84
SNF8-209ENST00000510558 USF3Q68DE3 2245 aa20.27■□□□□ 0.84
SNF8-209ENST00000510558 ZFHX3Q15911 3703 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 LIPT2A6NK58 231 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 OR5H1A6NKK0 313 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 C5orf58C9J3I9 102 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 RAD51DO75771 328 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 PGM3O95394 542 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 GPIP06744 558 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 IRX1P78414 480 aaPredicted RBP20.26■□□□□ 0.83
SNF8-209ENST00000510558 BSPH1Q075Z2 132 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 BNIP2Q12982 314 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 CEACAM7Q14002 265 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 SQLEQ14534 574 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 SLC17A1Q14916 467 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 OR7A5Q15622 319 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 AGKQ53H12 422 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 OTUD3Q5T2D3 398 aaPredicted RBP20.26■□□□□ 0.83
SNF8-209ENST00000510558 CASP12Q6UXS9 341 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 P2RY8Q86VZ1 359 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 CKAP2Q8WWK9 683 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 TMEM45AQ9NWC5 275 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 ASB6Q9NWX5 421 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 VAPAQ9P0L0 249 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 MALT1Q9UDY8 824 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 SLC9A8Q9Y2E8 581 aa20.26■□□□□ 0.83
SNF8-209ENST00000510558 CIB4A0PJX0 185 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 DPRXA6NFQ7 191 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 TMCC2O75069 709 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 AKR7A3O95154 331 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 INHBBP09529 407 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 ARAFP10398 606 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 PPIBP23284 216 aaKnown RBP20.25■□□□□ 0.83
SNF8-209ENST00000510558 FAPQ12884 760 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 GCNT6Q5T4J0 391 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 SSX8Q7RTT4 187 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 BIVMQ86UB2 503 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 C10orf111Q8N326 155 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 TMEM99Q8N816 258 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 NFKBIDQ8NI38 313 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 FBXW5Q969U6 566 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 C3orf49Q96BT1 292 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 MAGEB18Q96M61 343 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 Q96MF0 132 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 CXorf56Q9H5V9 222 aa20.25■□□□□ 0.83
SNF8-209ENST00000510558 TRBV5-3A0A0A0MS03 114 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 CCT8L1PA6NM43 557 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 A8MVM7 634 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 FRS3O43559 492 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 ETS2P15036 469 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 PAX1P15863 534 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 H2AFXP16104 143 aaPredicted RBP20.24■□□□□ 0.83
SNF8-209ENST00000510558 KBTBD8Q8NFY9 601 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 STON2Q8WXE9 905 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 NEUROG1Q92886 237 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 SLC35B4Q969S0 331 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 THOC1Q96FV9 657 aaKnown RBP20.24■□□□□ 0.83
SNF8-209ENST00000510558 SMR3AQ99954 134 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 ZNF701Q9NV72 531 aaPredicted RBP20.24■□□□□ 0.83
SNF8-209ENST00000510558 PARPBPQ9NWS1 579 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 TAS2R16Q9NYV7 291 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 NPAP1Q9NZP6 1156 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 LAMP3Q9UQV4 416 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 GMEB1Q9Y692 573 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 NF1P21359 2839 aa20.24■□□□□ 0.83
SNF8-209ENST00000510558 FOXG1P55316 489 aaPredicted RBP20.23■□□□□ 0.83
SNF8-209ENST00000510558 HOXC5Q00444 222 aa20.23■□□□□ 0.83
SNF8-209ENST00000510558 ZNF672Q499Z4 452 aaPredicted RBP20.23■□□□□ 0.83
SNF8-209ENST00000510558 C1orf140Q5VVS0 124 aa20.23■□□□□ 0.83
SNF8-209ENST00000510558 OR52E4Q8NGH9 312 aa20.23■□□□□ 0.83
SNF8-209ENST00000510558 TAPBPLQ9BX59 468 aa20.23■□□□□ 0.83
SNF8-209ENST00000510558 IKZF5Q9H5V7 419 aa20.23■□□□□ 0.83
SNF8-209ENST00000510558 ADPRHL2Q9NX46 363 aa20.23■□□□□ 0.83
SNF8-209ENST00000510558 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.23■□□□□ 0.83
SNF8-209ENST00000510558 A0A1W2PP18 115 aa20.22■□□□□ 0.83
SNF8-209ENST00000510558 AQP7P3A6NL99 342 aa20.22■□□□□ 0.83
SNF8-209ENST00000510558 TMEM229AB2RXF0 380 aa20.22■□□□□ 0.83
SNF8-209ENST00000510558 ITGA5P08648 1049 aa20.22■□□□□ 0.83
SNF8-209ENST00000510558 PRKAR1BP31321 381 aa20.22■□□□□ 0.83
SNF8-209ENST00000510558 RPS4XP62701 263 aaKnown RBP20.22■□□□□ 0.83
SNF8-209ENST00000510558 CDK6Q00534 326 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms