RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 DNAJA3Q96EY1 480 aa9.13□□□□□ -0.95
SNF8-207ENST00000509995 GPR22Q99680 433 aa9.13□□□□□ -0.95
SNF8-207ENST00000509995 OCSTAMPQ9BR26 566 aa9.13□□□□□ -0.95
SNF8-207ENST00000509995 TRIM5Q9C035 493 aa9.13□□□□□ -0.95
SNF8-207ENST00000509995 GLIPR2Q9H4G4 154 aa9.13□□□□□ -0.95
SNF8-207ENST00000509995 NMRAL1Q9HBL8 299 aa9.13□□□□□ -0.95
SNF8-207ENST00000509995 CRLF2Q9HC73 371 aa9.13□□□□□ -0.95
SNF8-207ENST00000509995 NMRK1Q9NWW6 199 aa9.13□□□□□ -0.95
SNF8-207ENST00000509995 UBAP1Q9NZ09 502 aa9.13□□□□□ -0.95
SNF8-207ENST00000509995 RNF14Q9UBS8 474 aa9.13□□□□□ -0.95
SNF8-207ENST00000509995 ZNF346Q9UL40 294 aaKnown RBP9.13□□□□□ -0.95
SNF8-207ENST00000509995 POLR3KQ9Y2Y1 108 aaPredicted RBP9.13□□□□□ -0.95
SNF8-207ENST00000509995 TANC2Q9HCD6 1990 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 TRAV40A0A0B4J280 105 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 IGHV1-69-2A0A0G2JMI3 117 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 ZNF587BE7ETH6 402 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 H3BNH8 94 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 XPNPEP2O43895 674 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 SKAP2O75563 359 aaPredicted RBP9.12□□□□□ -0.95
SNF8-207ENST00000509995 PIAS1O75925 651 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 HSPA4LO95757 839 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 IFI6P09912 130 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 TFPIP10646 304 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 ACP2P11117 423 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 NTSP30990 170 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 GLRXP35754 106 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 SERPINB4P48594 390 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 RAE1P78406 368 aaKnown RBP9.12□□□□□ -0.95
SNF8-207ENST00000509995 TEKQ02763 1124 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 CBFBQ13951 182 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 SLC17A1Q14916 467 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 CCNJQ5T5M9 372 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 CDRT4Q8N9R6 151 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 OR5W2Q8NH69 310 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 RFWD2Q8NHY2 731 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 C16orf78Q8WTQ4 265 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 SELENOMQ8WWX9 145 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 ST8SIA1Q92185 356 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 AURKBQ96GD4 344 aaPredicted RBP9.12□□□□□ -0.95
SNF8-207ENST00000509995 AMDHD1Q96NU7 426 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 ALKBH3Q96Q83 286 aaPredicted RBP9.12□□□□□ -0.95
SNF8-207ENST00000509995 SIRT3Q9NTG7 399 aaPredicted RBP9.12□□□□□ -0.95
SNF8-207ENST00000509995 GRID1Q9ULK0 1009 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 PCDHGB5Q9Y5G0 923 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 CACNG2Q9Y698 323 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 TEX264Q9Y6I9 313 aa9.12□□□□□ -0.95
SNF8-207ENST00000509995 A0A1W2PPW3 197 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 ISPDA4D126 451 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 AGAP5A6NIR3 686 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 GOLGA6L22H0YM25 854 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 GTPBP1O00178 669 aaKnown RBP9.11□□□□□ -0.95
SNF8-207ENST00000509995 KRT33AO76009 404 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 PPIAL4GP0DN37 164 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 PRPS2P11908 318 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 HOXB1P14653 301 aaPredicted RBP9.11□□□□□ -0.95
SNF8-207ENST00000509995 DDCP20711 480 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 FUT4P22083 530 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 ARR3P36575 388 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 DBPQ10586 325 aaPredicted RBP9.11□□□□□ -0.95
SNF8-207ENST00000509995 MERTKQ12866 999 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 DUSP5Q16690 384 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 GLIPR1L2Q4G1C9 344 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 ATP6AP1LQ52LC2 224 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 KLHL26Q53HC5 615 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.11□□□□□ -0.95
SNF8-207ENST00000509995 FOXB2Q5VYV0 432 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 METTL2BQ6P1Q9 378 aaKnown RBP9.11□□□□□ -0.95
SNF8-207ENST00000509995 Q6YL49 198 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 PDIK1LQ8N165 341 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 COX18Q8N8Q8 333 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 DYRK2Q92630 601 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 MAGOHBQ96A72 148 aaKnown RBP9.11□□□□□ -0.95
SNF8-207ENST00000509995 MARS2Q96GW9 593 aaKnown RBP9.11□□□□□ -0.95
SNF8-207ENST00000509995 NOX4Q9NPH5 578 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 GAR1Q9NY12 217 aaKnown RBP9.11□□□□□ -0.95
SNF8-207ENST00000509995 VPS29Q9UBQ0 182 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 FZR1Q9UM11 496 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 NFU1Q9UMS0 254 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 HDGFL3Q9Y3E1 203 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 TNPO3Q9Y5L0 923 aaKnown RBP9.11□□□□□ -0.95
SNF8-207ENST00000509995 POMT1Q9Y6A1 747 aa9.11□□□□□ -0.95
SNF8-207ENST00000509995 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 LCE6AA0A183 80 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 ZNF503-AS2A6NEH8 195 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 C17orf100A8MU93 164 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 GPR37O15354 613 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 ALOX5P09917 674 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 BCKDHAP12694 445 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 SESN3P58005 492 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 RPS23P62266 143 aaKnown RBP9.1□□□□□ -0.95
SNF8-207ENST00000509995 PAX8Q06710 450 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 NKPD1Q17RQ9 610 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 HFEQ30201 348 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 PCGF3Q3KNV8 242 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 ALKBH6Q3KRA9 238 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 KLHL22Q53GT1 634 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 CCDC137Q6PK04 289 aaKnown RBP9.1□□□□□ -0.95
SNF8-207ENST00000509995 PAQR6Q6TCH4 344 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 LRIG3Q6UXM1 1119 aa9.1□□□□□ -0.95
SNF8-207ENST00000509995 USP51Q70EK9 711 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms