RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 MEP1AQ16819 746 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 AASDHQ4L235 1098 aaPredicted RBP4.12□□□□□ -1.75
NIPBL-206ENST00000509429 CBWD6Q4V339 395 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF658BQ4V348 819 aaPredicted RBP4.12□□□□□ -1.75
NIPBL-206ENST00000509429 CBWD3Q5JTY5 395 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 CATSPEREQ5SY80 951 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 SPOUT1Q5T280 376 aaKnown RBP4.12□□□□□ -1.75
NIPBL-206ENST00000509429 DCAF12L1Q5VU92 463 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF626Q68DY1 528 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 TXNDC8Q6A555 127 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 ASPHD2Q6ICH7 369 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 FAM45BPQ6NSW5 357 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 ADAM5Q6NVV9 412 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 SLC27A4Q6P1M0 643 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 DNM1P34Q6PK57 102 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 CBLN3Q6UW01 205 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 DEF8Q6ZN54 512 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 SH2D5Q6ZV89 423 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 MEPCEQ7L2J0 689 aaKnown RBP4.12□□□□□ -1.75
NIPBL-206ENST00000509429 FCRLAQ7L513 359 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 G2E3Q7L622 706 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 DPY19L4Q7Z388 723 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 GRINAQ7Z429 371 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 TMEM144Q7Z5S9 345 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 XYLT1Q86Y38 959 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 WDFY1Q8IWB7 410 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 MFSD6LQ8IWD5 586 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 C4orf19Q8IY42 314 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 RDH10Q8IZV5 341 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 PGAM4Q8N0Y7 254 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 TMEM132CQ8N3T6 1108 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF480Q8WV37 535 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 FAR1Q8WVX9 515 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 RIT1Q92963 219 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 LHX4Q969G2 390 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 PTH2Q96A98 100 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 ANKRD9Q96BM1 317 aaPredicted RBP4.12□□□□□ -1.75
NIPBL-206ENST00000509429 C12orf43Q96C57 262 aaKnown RBP4.12□□□□□ -1.75
NIPBL-206ENST00000509429 LRRC3BQ96PB8 259 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 CD180Q99467 661 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 MTERF1Q99551 399 aaKnown RBP4.12□□□□□ -1.75
NIPBL-206ENST00000509429 MEIS3Q99687 375 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 RBBP8Q99708 897 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 EBF4Q9BQW3 602 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 NUDT22Q9BRQ3 303 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 SYT11Q9BT88 431 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 TMEM208Q9BTX3 173 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 PDCD10Q9BUL8 212 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF426Q9BUY5 554 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 MAP1LC3CQ9BXW4 147 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 SHARPINQ9H0F6 387 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF556Q9HAH1 456 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 TPT1P8Q9HAU6 139 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 RHOFQ9HBH0 211 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 ZNF334Q9HCZ1 680 aaPredicted RBP4.12□□□□□ -1.75
NIPBL-206ENST00000509429 C6orf50Q9HD87 102 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 HMG20AQ9NP66 347 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 RAB18Q9NP72 206 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 RAB9BQ9NP90 201 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 ASB6Q9NWX5 421 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 SPHK1Q9NYA1 384 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 GSKIPQ9P0R6 139 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 COPS7AQ9UBW8 275 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 CNOT8Q9UFF9 292 aaKnown RBP4.12□□□□□ -1.75
NIPBL-206ENST00000509429 IL17BQ9UHF5 180 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 MRTO4Q9UKD2 239 aaKnown RBP4.12□□□□□ -1.75
NIPBL-206ENST00000509429 RAB26Q9ULW5 256 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 GPR132Q9UNW8 380 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 RCE1Q9Y256 329 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 DRG1Q9Y295 367 aaKnown RBP4.12□□□□□ -1.75
NIPBL-206ENST00000509429 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.12□□□□□ -1.75
NIPBL-206ENST00000509429 UTP11Q9Y3A2 253 aaKnown RBP4.12□□□□□ -1.75
NIPBL-206ENST00000509429 OR10H1Q9Y4A9 318 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 CEMIPQ8WUJ3 1361 aa4.12□□□□□ -1.75
NIPBL-206ENST00000509429 ABCC6O95255 1503 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 NWD1Q149M9 1564 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 A0A1W2PPM1 405 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 NEMP2A6NFY4 417 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 CCDC160A6NGH7 325 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SLC38A8A6NNN8 435 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 OR11H12B2RN74 326 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 E9PQ18 207 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 PPIAL4DF5H284 164 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 H0YIG0 161 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 H3BNH8 94 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 H7C2Y5 167 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 CXCR6O00574 342 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 PDXKO00764 312 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 KCNK3O14649 394 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SLC16A4O15374 487 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 RGS5O15539 181 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 TGOLN2O43493 480 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 TIMM8AO60220 97 aaPredicted RBP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 PCDH7O60245 1069 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 RP2O75695 350 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 EIF3GO75821 320 aaKnown RBP eCLIP4.11□□□□□ -1.75
NIPBL-206ENST00000509429 SLC22A5O76082 557 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 LY86O95711 162 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 TTC4O95801 387 aa4.11□□□□□ -1.75
NIPBL-206ENST00000509429 PAK4O96013 591 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms