RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 VPS33AQ96AX1 596 aa11.92□□□□□ -0.5
LINC02171-201ENST00000508619 TMEM45BQ96B21 275 aa11.92□□□□□ -0.5
LINC02171-201ENST00000508619 ZBTB9Q96C00 473 aa11.92□□□□□ -0.5
LINC02171-201ENST00000508619 BOD1Q96IK1 185 aa11.92□□□□□ -0.5
LINC02171-201ENST00000508619 AMBRA1Q9C0C7 1298 aa11.92□□□□□ -0.5
LINC02171-201ENST00000508619 ASB6Q9NWX5 421 aa11.92□□□□□ -0.5
LINC02171-201ENST00000508619 DCTN4Q9UJW0 460 aa11.92□□□□□ -0.5
LINC02171-201ENST00000508619 ZNF443Q9Y2A4 671 aaPredicted RBP11.92□□□□□ -0.5
LINC02171-201ENST00000508619 PCDHB14Q9Y5E9 798 aa11.92□□□□□ -0.5
LINC02171-201ENST00000508619 FN1P02751 2386 aaKnown RBP11.92□□□□□ -0.5
LINC02171-201ENST00000508619 JMJD1CQ15652 2540 aa11.92□□□□□ -0.5
LINC02171-201ENST00000508619 A8MVM7 634 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 PDLIM1O00151 329 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 CLIC1O00299 241 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 FZD7O75084 574 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 NPIPB7O75200 414 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 VAMP5O95183 116 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 PLAUP00749 431 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 GPIP06744 558 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 DANCRP0C864 163 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 IMPDH2P12268 514 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 EDNRAP25101 427 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 ADSLP30566 484 aaPredicted RBP11.91□□□□□ -0.5
LINC02171-201ENST00000508619 IDUAP35475 653 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 IDH3AP50213 366 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 TSC22D1Q15714 1073 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 ZNF672Q499Z4 452 aaPredicted RBP11.91□□□□□ -0.5
LINC02171-201ENST00000508619 GTDC1Q4AE62 458 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 BLOC1S3Q6QNY0 202 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 HMGN2P46Q86SG4 172 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 VRK2Q86Y07 508 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 GOLGA6L1Q8N7Z2 621 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 LILRB1Q8NHL6 650 aaPredicted RBP11.91□□□□□ -0.5
LINC02171-201ENST00000508619 STK35Q8TDR2 534 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 PERPQ96FX8 193 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 AURKBQ96GD4 344 aaPredicted RBP11.91□□□□□ -0.5
LINC02171-201ENST00000508619 MUS81Q96NY9 551 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 TRIM2Q9C040 744 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 C12orf10Q9HB07 376 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 RLIMQ9NVW2 624 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 MGAT4BQ9UQ53 548 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 CHST2Q9Y4C5 530 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 FLVCR1Q9Y5Y0 555 aa11.91□□□□□ -0.5
LINC02171-201ENST00000508619 ZC3H12DA2A288 527 aaKnown RBP11.9□□□□□ -0.5
LINC02171-201ENST00000508619 DPRXA6NFQ7 191 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 OR6C65A6NJZ3 312 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 LIPT2A6NK58 231 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 AQP7P3A6NL99 342 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 HMGB1P1B2RPK0 211 aaPredicted RBP11.9□□□□□ -0.5
LINC02171-201ENST00000508619 HEXAP06865 529 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 HOXB4P17483 251 aaPredicted RBP11.9□□□□□ -0.5
LINC02171-201ENST00000508619 PAX7P23759 505 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 CXCR1P25024 350 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 PRKAR1BP31321 381 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 BSPH1Q075Z2 132 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 CAPRIN1Q14444 709 aaKnown RBP11.9□□□□□ -0.5
LINC02171-201ENST00000508619 C6orf89Q6UWU4 347 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 DTX2Q86UW9 622 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 FUNDC1Q8IVP5 155 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 CCDC103Q8IW40 242 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 GTPBP3Q969Y2 492 aaKnown RBP11.9□□□□□ -0.5
LINC02171-201ENST00000508619 SPDL1Q96EA4 605 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 Q96MF0 132 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 GSX1Q9H4S2 264 aaPredicted RBP11.9□□□□□ -0.5
LINC02171-201ENST00000508619 RABEP2Q9H5N1 569 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 EVA1AQ9H8M9 152 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 VIPAS39Q9H9C1 493 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 SLCO1B3Q9NPD5 702 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 SLC52A3Q9NQ40 469 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 CORO2BQ9UQ03 480 aa11.9□□□□□ -0.5
LINC02171-201ENST00000508619 TRBV5-3A0A0A0MS03 114 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 TMEM229AB2RXF0 380 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 CLOCKO15516 846 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 RAMP1O60894 148 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 PTAFRP25105 342 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 NTF4P34130 210 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 TGFBR3Q03167 851 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 STK11Q15831 433 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 TTMPQ5BVD1 217 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 ZNF311Q5JNZ3 666 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 OTUD3Q5T2D3 398 aaPredicted RBP11.89□□□□□ -0.51
LINC02171-201ENST00000508619 SLC2A7Q6PXP3 512 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 C5orf46Q6UWT4 87 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 TMEM108Q6UXF1 575 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 ATG4DQ86TL0 474 aaPredicted RBP11.89□□□□□ -0.51
LINC02171-201ENST00000508619 UBE2J2Q8N2K1 259 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 CLIP4Q8N3C7 705 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 LSMEM1Q8N8F7 131 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 POMGNT2Q8NAT1 580 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 SMAP2Q8WU79 429 aaPredicted RBP11.89□□□□□ -0.51
LINC02171-201ENST00000508619 C3orf49Q96BT1 292 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 ZNF775Q96BV0 537 aaPredicted RBP11.89□□□□□ -0.51
LINC02171-201ENST00000508619 TRMT61AQ96FX7 289 aaKnown RBP11.89□□□□□ -0.51
LINC02171-201ENST00000508619 TMEM38AQ9H6F2 299 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 FAIMQ9NVQ4 179 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 SLC25A37Q9NYZ2 338 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 MAGED1Q9Y5V3 778 aaPredicted RBP11.89□□□□□ -0.51
LINC02171-201ENST00000508619 SLC25A15Q9Y619 301 aa11.89□□□□□ -0.51
LINC02171-201ENST00000508619 CIB4A0PJX0 185 aa11.88□□□□□ -0.51
LINC02171-201ENST00000508619 SHISA9B4DS77 424 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms