RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 FAIMQ9NVQ4 179 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 P2RX2Q9UBL9 471 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 GDF2Q9UK05 429 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 SLC9A8Q9Y2E8 581 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 CUBNO60494 3623 aa11.44□□□□□ -0.58
HMGCS1-205ENST00000508319 MXRA5Q9NR99 2828 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 A0A1W2PR80 420 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 CIB4A0PJX0 185 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 CCT8L1PA6NM43 557 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 KIAA1324LA8MWY0 1029 aaPredicted RBP11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 SLCO1B7G3V0H7 640 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 SLC22A3O75751 556 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 GKN3PP0CG01 181 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 ETFAP13804 333 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 UQCRBP14927 111 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 IDUAP35475 653 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 ACVR1BP36896 505 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 ACAA2P42765 397 aaKnown RBP11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 MAP2K6P52564 334 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 SLC18A1P54219 525 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 PPP2R2BQ00005 443 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 GABRA6Q16445 453 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 GTDC1Q4AE62 458 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 LIN52Q52LA3 116 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 NXNQ6DKJ4 435 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 C11orf71Q6IPW1 123 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 PAQR6Q6TCH4 344 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 TMEM108Q6UXF1 575 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 B3GLCTQ6Y288 498 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 VRK2Q86Y07 508 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 PEX5LQ8IYB4 626 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 OR52E4Q8NGH9 312 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 OR9I1Q8NGQ6 314 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 RADILQ96JH8 1075 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 MUS81Q96NY9 551 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 ALG2Q9H553 416 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 HEATR1Q9H583 2144 aaKnown RBP11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 SLC7A10Q9NS82 523 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 ZIM2Q9NZV7 527 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 DCTN4Q9UJW0 460 aa11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 ZNF443Q9Y2A4 671 aaPredicted RBP11.43□□□□□ -0.58
HMGCS1-205ENST00000508319 LIPT2A6NK58 231 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 E7EQL1 145 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 BCHEP06276 602 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 TFPTP0C1Z6 253 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 ZCCHC18P0CG32 403 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 PTAFRP25105 342 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 CD40P25942 277 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 ZNF83P51522 516 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 CRISP3P54108 245 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 MAGOHP61326 146 aaKnown RBP11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 SLC25A3Q00325 362 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 GSTA3Q16772 222 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 RPS26P11Q5JNZ5 115 aaPredicted RBP11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 OTUD3Q5T2D3 398 aaPredicted RBP11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 TSPO2Q5TGU0 170 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 RNF220Q5VTB9 566 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 C9orf135Q5VTT2 229 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 ATG16L1Q676U5 607 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 OR7E24Q6IFN5 339 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 MSANTD1Q6ZTZ1 278 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 ZNF440Q8IYI8 595 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 TMEM99Q8N816 258 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 WDR31Q8NA23 367 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 C1orf162Q8NEQ5 155 aaPredicted RBP11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 SLC38A5Q8WUX1 472 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 TMEM45BQ96B21 275 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 TLCD1Q96CP7 247 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 AURKBQ96GD4 344 aaPredicted RBP11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 TMEM19Q96HH6 336 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 OR52B2Q96RD2 323 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 NAA11Q9BSU3 229 aaPredicted RBP11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 REG4Q9BYZ8 158 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 MANSC1Q9H8J5 431 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 TPT1P8Q9HAU6 139 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 CALML5Q9NZT1 146 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 ADAM21Q9UKJ8 722 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 MGAT4BQ9UQ53 548 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 CHST2Q9Y4C5 530 aa11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 FBN1P35555 2871 aaKnown RBP11.42□□□□□ -0.58
HMGCS1-205ENST00000508319 STAB1Q9NY15 2570 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 FRS3O43559 492 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 AKR7A3O95154 331 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 PRG2P13727 222 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 PTNP21246 168 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 TTKP33981 857 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 CRATP43155 626 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 P2RY4P51582 365 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 DSTNP60981 165 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 BNIP2Q12982 314 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 CEACAM7Q14002 265 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 OR7A5Q15622 319 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 SLC22A25Q6T423 547 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 KLHL17Q6TDP4 642 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 C17orf78Q8N4C9 275 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 ZIC4Q8N9L1 334 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 OR9K2Q8NGE7 335 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 OR52P1PQ8NH57 321 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 HS6ST2Q96MM7 605 aa11.41□□□□□ -0.58
HMGCS1-205ENST00000508319 ZNF385AQ96PM9 386 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms