RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 LSMEM1Q8N8F7 131 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 RASD2Q96D21 266 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 TRIM2Q9C040 744 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 NXF5Q9H1B4 397 aaKnown RBP13.28□□□□□ -0.28
DDX41-208ENST00000507955 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.28□□□□□ -0.28
DDX41-208ENST00000507955 PLCL2Q9UPR0 1127 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 RNF215Q9Y6U7 377 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 OR6C70A6NIJ9 312 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 TMEM150CB9EJG8 249 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 ZNF3P17036 446 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 BCKDHBP21953 392 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 ERVK-25P63136 954 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 IGLV3-21P80748 117 aaPredicted RBP13.28□□□□□ -0.28
DDX41-208ENST00000507955 CFHR1Q03591 330 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 FUT7Q11130 342 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 ZNF141Q15928 474 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 C1orf189Q5VU69 101 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 PLET1Q6UQ28 207 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 LINC00114Q6XXX2 140 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 GRAMD2AQ8IUY3 354 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 ORAI1Q96D31 301 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 TSSK2Q96PF2 358 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 GAL3ST4Q96RP7 486 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 RBFOX1Q9NWB1 397 aaKnown RBP13.28□□□□□ -0.28
DDX41-208ENST00000507955 ASB6Q9NWX5 421 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 TMEM5Q9Y2B1 443 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 PCNX3Q9H6A9 2034 aa13.28□□□□□ -0.28
DDX41-208ENST00000507955 A0A087WV48 116 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 A0A1W2PRG6 482 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 BLOC1S5-TXNDC5H3BN57 136 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 SMLR1H3BR10 107 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 ZNF217O75362 1048 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 HK1P19367 917 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 HLA-DMAP28067 261 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 AGFG1P52594 562 aaKnown RBP13.27□□□□□ -0.28
DDX41-208ENST00000507955 TMEM44Q2T9K0 475 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 OTPQ5XKR4 325 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 TRIQKQ629K1 86 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 CHRDL2Q6WN34 429 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 TRILQ7L0X0 811 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 OR6C4Q8NGE1 309 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 MOSPD2Q8NHP6 518 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 PHOSPHO1Q8TCT1 267 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 TMEM43Q9BTV4 400 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 POLE3Q9NRF9 147 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 ACOXLQ9NUZ1 547 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 C14orf105Q9NVL8 296 aa13.27□□□□□ -0.28
DDX41-208ENST00000507955 SLC22A31A6NKX4 558 aa13.27□□□□□ -0.29
DDX41-208ENST00000507955 CENPBD1B2RD01 187 aa13.27□□□□□ -0.29
DDX41-208ENST00000507955 IDSB3KWA1 339 aa13.27□□□□□ -0.29
DDX41-208ENST00000507955 LYRM1O43325 122 aa13.27□□□□□ -0.29
DDX41-208ENST00000507955 OR2B3O76000 313 aa13.27□□□□□ -0.29
DDX41-208ENST00000507955 PAHP00439 452 aa13.27□□□□□ -0.29
DDX41-208ENST00000507955 C19orf18Q8NEA5 215 aa13.27□□□□□ -0.29
DDX41-208ENST00000507955 C3orf49Q96BT1 292 aa13.27□□□□□ -0.29
DDX41-208ENST00000507955 ZC3HAV1LQ96H79 300 aaKnown RBP13.27□□□□□ -0.29
DDX41-208ENST00000507955 ADOQ96SZ5 270 aa13.27□□□□□ -0.29
DDX41-208ENST00000507955 UBE2ZQ9H832 354 aaPredicted RBP13.27□□□□□ -0.29
DDX41-208ENST00000507955 ERVMER34-1Q9H9K5 563 aa13.27□□□□□ -0.29
DDX41-208ENST00000507955 LANCL2Q9NS86 450 aa13.27□□□□□ -0.29
DDX41-208ENST00000507955 CHRNA9Q9UGM1 479 aa13.27□□□□□ -0.29
DDX41-208ENST00000507955 CLEC4AQ9UMR7 237 aa13.27□□□□□ -0.29
DDX41-208ENST00000507955 A0A0G2JMP0 313 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 RHPN2P1A8MT19 583 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 ERVH48-1M5A8F1 160 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 SOX30O94993 753 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 ELK1P19419 428 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 MAGEB1P43366 347 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 ZP2Q05996 745 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 ACSM1Q08AH1 577 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 LYPD8Q6UX82 237 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 C10orf53Q8N6V4 93 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 DUSP18Q8NEJ0 188 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 MOGAT1Q96PD6 335 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 KCNJ15Q99712 375 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 A0A0B4J203 849 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 OR6C68A6NDL8 312 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 LANCL1O43813 399 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 SELENOFO60613 162 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 CPNE3O75131 537 aaKnown RBP13.26□□□□□ -0.29
DDX41-208ENST00000507955 TFPIP10646 304 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 MST1P26927 711 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 SLC6A6P31641 620 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 CEACAM19Q7Z692 300 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 TCTE3Q8IZS6 198 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 BMPERQ8N8U9 685 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 SGTBQ96EQ0 304 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 AHCYL2Q96HN2 611 aaKnown RBP13.26□□□□□ -0.29
DDX41-208ENST00000507955 NDC1Q9BTX1 674 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 G6PC3Q9BUM1 346 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 SLA2Q9H6Q3 261 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 TRIM36Q9NQ86 728 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 SLC2A4RGQ9NR83 387 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 CUTCQ9NTM9 273 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 PCDHGB7Q9Y5F8 929 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 EML5Q05BV3 1969 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 IGKV1D-42A0A075B6H8 117 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 A0A087WUJ7 227 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 A0A0X1KG70 313 aa13.26□□□□□ -0.29
DDX41-208ENST00000507955 TLCD2A6NGC4 264 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms