RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 ZNF740Q8NDX6 193 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 TRPV1Q8NER1 839 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 OR4K14Q8NGD5 310 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 BRSK1Q8TDC3 778 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 ZNF606Q8WXB4 792 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 FGF11Q92914 225 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 NUS1Q96E22 293 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 IMMP1LQ96LU5 166 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 PLEKHF1Q96S99 279 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 RNF2Q99496 336 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 COPS8Q99627 209 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 AIG1Q9NVV5 245 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 KIF25Q9UIL4 384 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 STAP1Q9ULZ2 295 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 TMCO1Q9UM00 188 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 RPL36Q9Y3U8 105 aaKnown RBP2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 V9GY05 133 aa2.84□□□□□ -1.95
HMGB1P28-201ENST00000507778 ARHGAP23Q9P227 1491 aa2.84□□□□□ -1.96
HMGB1P28-201ENST00000507778 CFAP65Q6ZU64 1925 aaKnown RBP2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 IGHV3OR16-13A0A075B7E8 117 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 IGKV1D-8A0A087WSZ0 117 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 IGHV1OR21-1A0A087WYE8 117 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 TCRBV9S1A1TA0A576 114 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 ABCD4O14678 606 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 NBR2O15453 112 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 MBTPS2O43462 519 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 RAMP3O60896 148 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 ZNF780AO75290 641 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 SUPT7LO94864 414 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 IGLV1-47P01700 117 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 HPNP05981 417 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 SHMT2P34897 504 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 RBMXP38159 391 aaKnown RBP2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 DDOSTP39656 456 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 QARSP47897 775 aaKnown RBP2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 DUSP3P51452 185 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 SELENOTP62341 195 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 TNFRSF17Q02223 184 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 TLE4Q04727 773 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 ARFRP1Q13795 201 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 VGLL4Q14135 290 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 OXA1LQ15070 435 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 ZMYND11Q15326 602 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 PARP15Q460N3 678 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 CEP55Q53EZ4 464 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 OR52E8Q6IFG1 317 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 UTS2BQ765I0 119 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 OR52H1Q8NGJ2 320 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 MAGEE2Q8TD90 523 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 C10orf35Q96D05 121 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 CXorf40BQ96DE9 158 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 TIMD4Q96H15 378 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 YY1AP1Q9H869 796 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 FN3KRPQ9HA64 309 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 MCCC2Q9HCC0 563 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 THUMPD1Q9NXG2 353 aaKnown RBP2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 BFARQ9NZS9 450 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 CELA1Q9UNI1 258 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 TRAF3IP3Q9Y228 551 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 ASF1AQ9Y294 204 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 PIGLQ9Y2B2 252 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 PLEKHH1Q9ULM0 1364 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 ATP10AO60312 1499 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 ABCA7Q8IZY2 2146 aa2.83□□□□□ -1.96
HMGB1P28-201ENST00000507778 NOTCH3Q9UM47 2321 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 SYNJ2BP-COX16A0A087WUM0 186 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 IGKV6D-41A0A0C4DH26 115 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 A6NIZ1 184 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 CXCL11O14625 94 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 TIMM8AO60220 97 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 B4GALT2O60909 372 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 CLDN9O95484 217 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 OXSR1O95747 527 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 OPN1MWP04001 364 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 KLK3P07288 261 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 OPN1MW2P0DN77 364 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 OPN1MW3P0DN78 364 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 NPR2P20594 1047 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 FUT3P21217 361 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 CD1BP29016 333 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 IL12AP29459 219 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 KIR2DS4P43632 304 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 KLK7P49862 253 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 GPM6AP51674 278 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 CRYBB1P53674 252 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 ATP1B3P54709 279 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 KRTAP10-3P60369 221 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 RAP1BP61224 184 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 GNB2P62879 340 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 TGFBR3Q03167 851 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 IL17AQ16552 155 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 DUSP7Q16829 419 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 MICBQ29980 383 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 MAJINQ3KP22 176 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 FILIP1LQ4L180 1135 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 CARD16Q5EG05 197 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 OR2G6Q5TZ20 316 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 TIGD3Q6B0B8 471 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 TMIGD1Q6UXZ0 262 aa2.82□□□□□ -1.96
HMGB1P28-201ENST00000507778 PGAP1Q75T13 922 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms