RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ARPC5O15511 151 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 TGM5O43548 720 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 PROS1P07225 676 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 CLUP10909 449 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 NID1P14543 1247 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 SDHBP21912 280 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 SLC6A6P31641 620 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 RAB28P51157 221 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 MAZP56270 477 aaKnown RBP16.35■□□□□ 0.21
NUP54-205ENST00000507257 CAP1Q01518 475 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 RBMS2Q15434 407 aaKnown RBP16.35■□□□□ 0.21
NUP54-205ENST00000507257 EXOSC6Q5RKV6 272 aaKnown RBP16.35■□□□□ 0.21
NUP54-205ENST00000507257 SPOUT1Q5T280 376 aaKnown RBP16.35■□□□□ 0.21
NUP54-205ENST00000507257 ZNF660Q6AZW8 331 aaPredicted RBP16.35■□□□□ 0.21
NUP54-205ENST00000507257 ZNF613Q6PF04 617 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 ZNF619Q8N2I2 560 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 WFIKKN2Q8TEU8 576 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 PIGKQ92643 395 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 MIB2Q96AX9 1013 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 ARRDC3Q96B67 414 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 OTUB2Q96DC9 234 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 GPR160Q9UJ42 338 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 KCNK7Q9Y2U2 307 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 LGALS8O00214 317 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 SLC35G4P0C7Q5 338 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 CERS1P27544 350 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 ZMYND11Q15326 602 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 CSRP2Q16527 193 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 TMEM69Q5SWH9 247 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 FAM111BQ6SJ93 734 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 FCRLAQ7L513 359 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 OR2L13Q8N349 312 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 OR2L8Q8NGY9 312 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 SMAP2Q8WU79 429 aaPredicted RBP16.35■□□□□ 0.21
NUP54-205ENST00000507257 C10orf90Q96M02 699 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 SLC38A3Q99624 504 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 SLC6A20Q9NP91 592 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 NOX4Q9NPH5 578 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 V9GY05 133 aa16.35■□□□□ 0.21
NUP54-205ENST00000507257 F5H5P2 479 aa16.34■□□□□ 0.21
NUP54-205ENST00000507257 H2AFB1P0C5Y9 115 aa16.34■□□□□ 0.21
NUP54-205ENST00000507257 MPGP29372 298 aa16.34■□□□□ 0.21
NUP54-205ENST00000507257 B2MP61769 119 aa16.34■□□□□ 0.21
NUP54-205ENST00000507257 NHLRC1Q6VVB1 395 aa16.34■□□□□ 0.21
NUP54-205ENST00000507257 DGLUCYQ7Z3D6 616 aa16.34■□□□□ 0.21
NUP54-205ENST00000507257 OR7G2Q8NG99 324 aa16.34■□□□□ 0.21
NUP54-205ENST00000507257 OR14A16Q8NHC5 309 aa16.34■□□□□ 0.21
NUP54-205ENST00000507257 C1orf216Q8TAB5 229 aa16.34■□□□□ 0.21
NUP54-205ENST00000507257 NPAS1Q99742 590 aa16.34■□□□□ 0.21
NUP54-205ENST00000507257 TAS2R8Q9NYW2 309 aa16.34■□□□□ 0.21
NUP54-205ENST00000507257 FBXL2Q9UKC9 423 aa16.34■□□□□ 0.21
NUP54-205ENST00000507257 PRKAB1Q9Y478 270 aa16.34■□□□□ 0.21
NUP54-205ENST00000507257 TCRBV16S1A1N1A0A5B0 115 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 PPP1R3DO95685 299 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 ADRB3P13945 408 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 GLULP15104 373 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 EDNRAP25101 427 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 ST8SIA6P61647 398 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 CBFBQ13951 182 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 LTB4RQ15722 352 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 ZNF77Q15935 545 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 PABPC1L2AQ5JQF8 200 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 HES5Q5TA89 166 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.33■□□□□ 0.214e-6■□□□□ 8.6
NUP54-205ENST00000507257 SLC35F2Q8IXU6 374 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 LRRC25Q8N386 305 aaPredicted RBP16.33■□□□□ 0.21
NUP54-205ENST00000507257 RFLNBQ8N5W9 214 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 CAMKVQ8NCB2 501 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 OR2AK2Q8NG84 335 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 SYNPRQ8TBG9 265 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 ZDHHC1Q8WTX9 485 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 PRDM9Q9NQV7 894 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 FBXL4Q9UKA2 621 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 ZNF281Q9Y2X9 895 aa16.33■□□□□ 0.21
NUP54-205ENST00000507257 CTNSO60931 367 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 C8AP07357 584 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 UBBP0CG47 229 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 UBCP0CG48 685 aaKnown RBP16.33■□□□□ 0.2
NUP54-205ENST00000507257 VSIG10L2P0DP72 767 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 LAMP2P13473 410 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 HOXB1P14653 301 aaPredicted RBP16.33■□□□□ 0.2
NUP54-205ENST00000507257 DCTDP32321 178 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 CCR2P41597 374 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 RBM34P42696 430 aaKnown RBP16.33■□□□□ 0.2
NUP54-205ENST00000507257 ART1P52961 327 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 H2BFSP57053 126 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 TAS2R20P59543 309 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 RPS27AP62979 156 aaKnown RBP16.33■□□□□ 0.2
NUP54-205ENST00000507257 UBA52P62987 128 aaKnown RBP16.33■□□□□ 0.2
NUP54-205ENST00000507257 LGALS3BPQ08380 585 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 DUSP5Q16690 384 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 MRPL2Q5T653 305 aaKnown RBP16.33■□□□□ 0.2
NUP54-205ENST00000507257 LILRA6Q6PI73 481 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 CYB561A3Q8NBI2 242 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 SNX33Q8WV41 574 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 GCDHQ92947 438 aaPredicted RBP16.33■□□□□ 0.2
NUP54-205ENST00000507257 DMRTA2Q96SC8 542 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 ZNF559Q9BR84 538 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 ZNF426Q9BUY5 554 aa16.33■□□□□ 0.2
NUP54-205ENST00000507257 MRPS30Q9NP92 439 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms