RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 OR2B6P58173 313 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 SORDQ00796 357 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 RASGEF1BQ0VAM2 473 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 BNIP2Q12982 314 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 ERICH5Q6P6B1 374 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 ARPINQ7Z6K5 226 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 CALHM3Q86XJ0 350 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 TUSC5Q8IXB3 177 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 SLC43A2Q8N370 569 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 OR52E4Q8NGH9 312 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 MBD6Q96DN6 1003 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 CMTM5Q96DZ9 223 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 TMEM181Q9P2C4 612 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 KLHL9Q9P2J3 617 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 KLHL13Q9P2N7 655 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 USP22Q9UPT9 525 aa11.68□□□□□ -0.54
TCOF1-209ENST00000506630 ELOA3DA6NLF2 546 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-209ENST00000506630 CCT8L1PA6NM43 557 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 M0R3H8 397 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 CYTIPO60759 359 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 GCM2O75603 506 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-209ENST00000506630 IMPDH2P12268 514 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 POU2F1P14859 743 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 HTR2AP28223 471 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 IDUAP35475 653 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 MAP2K6P52564 334 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 DUSP7Q16829 419 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 EXOC3L2Q2M3D2 409 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 ELOA3BQ3SY89 546 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 FBXW10Q5XX13 1052 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 ABLIM2Q6H8Q1 611 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 ZNF474Q6S9Z5 364 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-209ENST00000506630 Q71RC1 249 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-209ENST00000506630 ATG4DQ86TL0 474 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-209ENST00000506630 RANBP3LQ86VV4 465 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-209ENST00000506630 CDC20BQ86Y33 519 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 ZNF610Q8N9Z0 462 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 ELOA3Q8NG57 546 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 OR2T12Q8NG77 320 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 RNF217Q8TC41 542 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 TAMM41Q96BW9 452 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 C18orf12Q96KH6 178 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 ZNF300Q96RE9 604 aaPredicted RBP11.67□□□□□ -0.54
TCOF1-209ENST00000506630 PSD2Q9BQI7 771 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 PRR14Q9BWN1 585 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 TRIM2Q9C040 744 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 EVA1AQ9H8M9 152 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 EFCAB1Q9HAE3 211 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 CRIM1Q9NZV1 1036 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 SELENONQ9NZV5 590 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 PRDM4Q9UKN5 801 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 ARL2BPQ9Y2Y0 163 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 VPS13CQ709C8 3753 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 PRR14LQ5THK1 2151 aa11.67□□□□□ -0.54
TCOF1-209ENST00000506630 A0A1B0GWA3 101 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 TUBAL3A6NHL2 446 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 A8MVM7 634 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 DNPH1O43598 174 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 LGI1O95970 557 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 PRDX6P30041 224 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 CD79BP40259 229 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 SLC7A2P52569 658 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 SLC35A1P78382 337 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 FAM27E3Q08E93 113 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 KEAP1Q14145 624 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 OR7A5Q15622 319 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 LRRC23Q53EV4 343 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-209ENST00000506630 CCDC80Q76M96 950 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 NUFIP2Q7Z417 695 aaKnown RBP11.66□□□□□ -0.54
TCOF1-209ENST00000506630 PIGWQ7Z7B1 504 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 STK32CQ86UX6 486 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 GPR32P1Q8NGA4 272 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 VANGL1Q8TAA9 524 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-209ENST00000506630 LINC01560Q8TB33 94 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 PIGXQ8TBF5 258 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 RASSF5Q8WWW0 418 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 ZNF583Q96ND8 569 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 WFDC6Q9BQY6 131 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 TACO1Q9BSH4 297 aaKnown RBP11.66□□□□□ -0.54
TCOF1-209ENST00000506630 NAA11Q9BSU3 229 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-209ENST00000506630 TAPBPLQ9BX59 468 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 TMEM27Q9HBJ8 222 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 GP6Q9HCN6 339 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 CMTM6Q9NX76 183 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 TRAPPC4Q9Y296 219 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 AP3M1Q9Y2T2 418 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 FBN3Q75N90 2809 aa11.66□□□□□ -0.54
TCOF1-209ENST00000506630 ELOVL7A1L3X0 281 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 A6NNC1 897 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 TMEM229AB2RXF0 380 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 DCTN3O75935 186 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 AHSA1O95433 338 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 RAF1P04049 648 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 GPIP06744 558 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 C8BP07358 591 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 YES1P07947 543 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 CD247P20963 164 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 FPR1P21462 350 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 CEACAM7Q14002 265 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 VEZF1Q14119 521 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms