RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 DTX3Q8N9I9 347 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 TTC29Q8NA56 475 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 C11orf65Q8NCR3 313 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 NFAM1Q8NET5 270 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 SETD6Q8TBK2 473 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 TRNT1Q96Q11 434 aaKnown RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 TPSD1Q9BZJ3 242 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 RNF32Q9H0A6 362 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 FBXO8Q9NRD0 319 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 POT1Q9NUX5 634 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 ALKBH4Q9NXW9 302 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 ANKMY1Q9P2S6 941 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 FAF1Q9UNN5 650 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 PRR23AA6NEV1 266 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 SGK494L7N484 410 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 SEC14L5O43304 696 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 SSX4O60224 188 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 IGHA1P01876 353 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 PIPP12273 146 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 CPMP14384 443 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 NR4A1P22736 598 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 HPCAL1P37235 193 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 SLC37A1P57057 533 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 NCS1P62166 190 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 C1orf61Q13536 156 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 PCOLCEQ15113 449 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 ZNF79Q15937 498 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 AASDHQ4L235 1098 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 KLHL26Q53HC5 615 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 CRIP3Q6Q6R5 217 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 FIGLAQ6QHK4 219 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 ZNF786Q8N393 782 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 NCLNQ969V3 563 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 AIF1LQ9BQI0 150 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 HDHD5Q9BXW7 423 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 SPRTNQ9H040 489 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 PHPT1Q9NRX4 125 aaPredicted RBP5.36□□□□□ -1.55
SCLT1-207ENST00000506233 IL19Q9UHD0 177 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 V9GYH0 126 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 CACNA1EQ15878 2313 aa5.36□□□□□ -1.55
SCLT1-207ENST00000506233 NPIPA5A0A0B4J1W7 369 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 A0A0G2JK05 382 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 GNG14A0A1W2PPG7 69 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 PMS2P1A4D2B8 440 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 NPIPA7E9PJI5 369 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 WWP2O00308 870 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 RGS10O43665 173 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 KCNK2O95069 426 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 NPIPA8P0DM63 369 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 OPRL1P41146 370 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 CAPZBP47756 277 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 BTN3A2P78410 334 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 MAT1AQ00266 395 aaKnown RBP5.35□□□□□ -1.55
SCLT1-207ENST00000506233 PMP22Q01453 160 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 CHRNB3Q05901 458 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 EXOSC7Q15024 291 aaKnown RBP5.35□□□□□ -1.55
SCLT1-207ENST00000506233 CD226Q15762 336 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 CSRP2Q16527 193 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 TMEM44Q2T9K0 475 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 GPR107Q5VW38 600 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 FAM122BQ7Z309 247 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 DEFB119Q8N690 84 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 ABHD5Q8WTS1 349 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 NECTIN4Q96NY8 510 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 MAP3K3Q99759 626 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 SH3GL1Q99961 368 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 ZPBPQ9BS86 351 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 YIPF2Q9BWQ6 316 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 SPRY4Q9C004 299 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 PCBD2Q9H0N5 130 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 MIXL1Q9H2W2 232 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 PROK2Q9HC23 129 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 MCCC2Q9HCC0 563 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 HCN3Q9P1Z3 774 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 LRIT1Q9P2V4 623 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 EXOGQ9Y2C4 368 aaKnown RBP5.35□□□□□ -1.55
SCLT1-207ENST00000506233 HS6ST1O60243 411 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 TOX4O94842 621 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 STSP08842 583 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 POU2F1P14859 743 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 SPNP16150 400 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 NDUFS1P28331 727 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 PRKAR1BP31321 381 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 CDKN1AP38936 164 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 NCBP2P52298 156 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCLT1-207ENST00000506233 CDH12P55289 794 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 RPS15AP62244 130 aaKnown RBP5.35□□□□□ -1.55
SCLT1-207ENST00000506233 DEFB110Q30KQ9 67 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 PAGE2BQ5JRK9 111 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 C6orf163Q5TEZ5 329 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 TMEM200BQ69YZ2 307 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 CLEC9AQ6UXN8 241 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 TMEM91Q6ZNR0 172 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 ASPGQ86U10 573 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 GRAMD2AQ8IUY3 354 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 SIRT6Q8N6T7 355 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 OR10G2Q8NGC3 310 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 OR9A4Q8NGU2 314 aa5.35□□□□□ -1.55
SCLT1-207ENST00000506233 MBD3L2Q8NHZ7 208 aaPredicted RBP5.35□□□□□ -1.55
SCLT1-207ENST00000506233 ZNF501Q96CX3 271 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms