RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 AGAP5A6NIR3 686 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 FAAHO00519 579 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 ITM2AO43736 263 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 TYROBPO43914 113 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 CPSF4O95639 269 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 CHRM4P08173 479 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 BMP4P12644 408 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 RPS4Y1P22090 263 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 TACR3P29371 465 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 GZMKP49863 264 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 HPCAP84074 193 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 TGFBR3Q03167 851 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 GPAT3Q53EU6 434 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 SPANXN4Q5MJ08 99 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 ANXA8L1Q5VT79 327 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 CMIPQ8IY22 773 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 ZNF781Q8N8C0 355 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 ANKFN1Q8N957 763 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 DDIT4LQ96D03 193 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 PPP1R36Q96LQ0 422 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 ZNF385AQ96PM9 386 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 SLC35A5Q9BS91 424 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 NAA11Q9BSU3 229 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 PRR14Q9BWN1 585 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 SLC38A1Q9H2H9 487 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 MARCOQ9UEW3 520 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 MOKQ9UQ07 419 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 PMF1-BGLAPU3KQ54 211 aa12.34□□□□□ -0.43
POLR2J3-207ENST00000503564 SVEP1Q4LDE5 3571 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 NDUFS8O00217 210 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 SRD5A1P18405 259 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 SLC1A3P43003 542 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 NR4A2P43354 598 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 PDLIM4P50479 330 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 MAP2K6P52564 334 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 PRPS1P60891 318 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 SRSF2Q01130 221 aaKnown RBP12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 EPS8Q12929 822 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 GGTLC2Q14390 218 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 SYPL1Q16563 259 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 HIKESHIQ53FT3 197 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 FAM166AQ6J272 317 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 IL17RELQ6ZVW7 336 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 RNF130Q86XS8 419 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 OR9K2Q8NGE7 335 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 PMM1Q92871 262 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 MSI2Q96DH6 328 aaKnown RBP12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 FBXO17Q96EF6 278 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 PKNOX2Q96KN3 472 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 CCDC115Q96NT0 180 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 TRNT1Q96Q11 434 aaKnown RBP12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 C19orf24Q9BVV8 132 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 KCNS2Q9ULS6 477 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 FKBP7Q9Y680 259 aa12.33□□□□□ -0.44
POLR2J3-207ENST00000503564 ANK2Q01484 3957 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 IGHV1-18A0A0C4DH31 117 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 IGHV4-61A0A0C4DH41 118 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 LIPT2A6NK58 231 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 AQP7P3A6NL99 342 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 WNT11O96014 354 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 CHI3L1P36222 383 aaPredicted RBP12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 P2RY4P51582 365 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 DPY19L1Q2PZI1 675 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 FAM174BQ3ZCQ3 159 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 FAM120AOSQ5T036 256 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 OTUD3Q5T2D3 398 aaPredicted RBP12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 MRPL2Q5T653 305 aaKnown RBP12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 KLHL24Q6TFL4 600 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 TMEM99Q8N816 258 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 POMGNT2Q8NAT1 580 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 VPS37AQ8NEZ2 397 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 WDR60Q8WVS4 1066 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 SORT1Q99523 831 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 PIMREGQ9BSJ6 248 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 SF3B5Q9BWJ5 86 aaKnown RBP12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 C20orf27Q9GZN8 174 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 ADAM19Q9H013 955 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 CHODLQ9H9P2 273 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 OBP2BQ9NPH6 170 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 BTNL2Q9UIR0 455 aa12.32□□□□□ -0.44
POLR2J3-207ENST00000503564 NBEAL1Q6ZS30 2694 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 CFAP73A6NFT4 308 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 E9PBE3 544 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 KLF11O14901 512 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 AKR7A3O95154 331 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 SERPINE1P05121 402 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 CLNS1AP54105 237 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 SNRPD2P62316 118 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 CEACAM7Q14002 265 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 OR7A5Q15622 319 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 MAPK11Q15759 364 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 TBRG1Q3YBR2 411 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 LRRC74BQ6ZQY2 392 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 AAED1Q7RTV5 226 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 NUDCD3Q8IVD9 361 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 ANKS4BQ8N8V4 417 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 OR1K1Q8NGR3 316 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 TEX37Q96LM6 180 aa12.31□□□□□ -0.44
POLR2J3-207ENST00000503564 SLC38A2Q96QD8 506 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms