RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 CCR1P32246 355 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 DAPP51397 102 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 PRKXP51817 358 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 ATXN1P54253 815 aaKnown RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 ARPP19P56211 112 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 VSX2P58304 361 aaPredicted RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 HNRNPKP61978 463 aaKnown RBP eCLIP2.57□□□□□ -2
NEDD4-204ENST00000503468 ERVK-25P63136 954 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 SELENOWP63302 87 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 CTBP1Q13363 440 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 DOC2AQ14183 400 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 ARL6IP1Q15041 203 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 HSPB2Q16082 182 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 KCNA10Q16322 511 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 PYCR3Q53H96 274 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 TMEM196Q5HYL7 178 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 PRRC2BQ5JSZ5 2229 aaKnown RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 DCST1Q5T197 706 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 AKR1C8PQ5T2L2 129 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 YOD1Q5VVQ6 348 aaPredicted RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 ANKRD16Q6P6B7 361 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 DLK2Q6UY11 383 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 QSOX2Q6ZRP7 698 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 TMPRSS9Q7Z410 1059 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 PIP4P1Q86T03 277 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 BAP18Q8IXM2 172 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 TRIM43Q96BQ3 446 aaPredicted RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 RBM18Q96H35 190 aaKnown RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 LINC00052Q96N35 136 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 CDK15Q96Q40 435 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 PIP5K1AQ99755 562 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 MIR1-1HGQ9H1L0 117 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 OR52A5Q9H2C5 316 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 CLMPQ9H6B4 373 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 PCTPQ9UKL6 214 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 FARSAQ9Y285 508 aaKnown RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 PTPN13Q12923 2485 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 A0A1W2PQ45 241 aaPredicted RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 A0A1W2PQY0 241 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 CDHR4A6H8M9 788 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 C5orf52A6NGY3 159 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 SMLR1H3BR10 107 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 NDUFS8O00217 210 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 SLC31A2O15432 143 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 NARSO43776 548 aaKnown RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 OR2T1O43869 369 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 SCO1O75880 301 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 SCGNO76038 276 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 PMS2P2O95744 297 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 GBAP04062 536 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 HLA-DQB2P05538 268 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 DGKAP23743 735 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 AOAHP28039 575 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 IGFALSP35858 605 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 UFM1P61960 85 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 ARF6P62330 175 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 RPL38P63173 70 aaKnown RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 VLDLRP98155 873 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 NHLH2Q02577 135 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 GLO1Q04760 184 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 DUSP4Q13115 394 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 AIMP2Q13155 320 aaKnown RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 HLXQ14774 488 aaPredicted RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 SF1Q15637 639 aaKnown RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 USF2Q15853 346 aaPredicted RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 FLYWCH1Q4VC44 716 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 CLEC6AQ6EIG7 209 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 RPL22L1Q6P5R6 122 aaKnown RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 NPNTQ6UXI9 565 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 SLC39A5Q6ZMH5 540 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 SMIM15Q7Z3B0 74 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 P4HA3Q7Z4N8 544 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 DPPA2Q7Z7J5 298 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 LDB1Q86U70 411 aaPredicted RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 PARGQ86W56 976 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 OR6X1Q8NH79 312 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 OR14A16Q8NHC5 309 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 ZNF671Q8TAW3 534 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 PIGXQ8TBF5 258 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 XAGE5Q8WWM1 108 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 CORO2AQ92828 525 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 ACSF2Q96CM8 615 aaPredicted RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 MTFMTQ96DP5 389 aaKnown RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 SCGB3A2Q96PL1 93 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 ACOX2Q99424 681 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 MRPS23Q9Y3D9 190 aaKnown RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 MTCH2Q9Y6C9 303 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 GCN1Q92616 2671 aaKnown RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 CBY3A6NI87 242 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 UBFD1O14562 309 aaKnown RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 NUPL2O15504 423 aaKnown RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 FRS3O43559 492 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 SELENOFO60613 162 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 STC2O76061 302 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 OR4E1P0C645 316 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 TAL1P17542 331 aaPredicted RBP2.57□□□□□ -2
NEDD4-204ENST00000503468 CD80P33681 288 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 OPRD1P41143 372 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 CSKP41240 450 aa2.57□□□□□ -2
NEDD4-204ENST00000503468 PTGFRP43088 359 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms