RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CCDC115Q96NT0 180 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 KCNK17Q96T54 332 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 TMEM109Q9BVC6 243 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 LINC00470Q9BZP3 86 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 QRSL1Q9H0R6 528 aaKnown RBP5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 OR51I1Q9H343 314 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 C12orf65Q9H3J6 166 aaKnown RBP5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF442Q9H7R0 627 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 CTPS2Q9NRF8 586 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 UPB1Q9UBR1 384 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 OSGIN1Q9UJX0 560 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 POU2F3Q9UKI9 436 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 FIS1Q9Y3D6 152 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 RAP2CQ9Y3L5 183 aa5.34□□□□□ -1.55
LSM3P4-201ENST00000502948 DSPPQ9NZW4 1301 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 TMED7-TICAM2A0A0A6YYA0 188 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 CENPVL1A0A0U1RR11 272 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 LOC102725191A0A1B0GVB3 256 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 PRAMEF27A3QJZ7 478 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 LIPT2A6NK58 231 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 AQP7P3A6NL99 342 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 NPIPB7O75200 414 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 IGLV1-44P01699 117 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 PGRP06401 933 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 DBIP07108 87 aaKnown RBP5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 TACSTD2P09758 323 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 MYZAPP0CAP1 466 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 OR12D1P0DN82 309 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 TFPIP10646 304 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 IMPDH2P12268 514 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 HNF1AP20823 631 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 IDH2P48735 452 aaKnown RBP5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 RPL14P50914 215 aaKnown RBP5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF83P51522 516 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 HPCAP84074 193 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 SPOCK1Q08629 439 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 EPS8Q12929 822 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 TSPO2Q5TGU0 170 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 RNF220Q5VTB9 566 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 ALKBH2Q6NS38 261 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 KLHL24Q6TFL4 600 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 C5orf46Q6UWT4 87 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 DEF8Q6ZN54 512 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 CLECL1Q8IZS7 167 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 RFLNBQ8N5W9 214 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 ZIC4Q8N9L1 334 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 GLB1L3Q8NCI6 653 aaPredicted RBP5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 ATP6V1C2Q8NEY4 427 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 IL17RDQ8NFM7 739 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 OR4F15Q8NGB8 312 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 OR4A15Q8NGL6 344 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 OR5AK3PQ8NH89 298 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 OR2W6PQ8NHA6 318 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 ZFAND2BQ8WV99 257 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 XAGE5Q8WWM1 108 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 NEU4Q8WWR8 484 aaPredicted RBP5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 ZG16BQ96DA0 208 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 RHOXF2Q9BQY4 288 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 PIMREGQ9BSJ6 248 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 C1orf50Q9BV19 199 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 DPY30Q9C005 99 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC38A1Q9H2H9 487 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 PLK3Q9H4B4 646 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 AKTIPQ9H8T0 292 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 C12orf10Q9HB07 376 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC7A10Q9NS82 523 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 CA10Q9NS85 328 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 TMEM45AQ9NWC5 275 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 THUMPD1Q9NXG2 353 aaKnown RBP5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 CALML5Q9NZT1 146 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 KCNS2Q9ULS6 477 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 RCE1Q9Y256 329 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 TMED7Q9Y3B3 224 aa5.33□□□□□ -1.56
LSM3P4-201ENST00000502948 SVEP1Q4LDE5 3571 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 A0A0A6YYJ9 748 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 TMEM72A0PK05 275 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 CDHR4A6H8M9 788 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 CFAP73A6NFT4 308 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 A8MVM7 634 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 VSTM5A8MXK1 200 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 C9JVG2 144 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 FTCDNL1E5RQL4 147 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 E9PBE3 544 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 SLCO1B7G3V0H7 640 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 M0R1B8 84 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 TM9SF1O15321 606 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 SKAP2O75563 359 aaPredicted RBP5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 CYP7B1O75881 506 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 CRYAAP02489 173 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 ZCCHC18P0CG32 403 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 IL7RP16871 459 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF23P17027 643 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 SRD5A1P18405 259 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 LBPP18428 481 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 PCMT1P22061 227 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 IGFBP5P24593 272 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 TACR3P29371 465 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 SOAT1P35610 550 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 SERPINF1P36955 418 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 EVX1P49640 407 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms