RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 MAP2K3P46734 347 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 MRPL28Q13084 256 aaKnown RBP10.98□□□□□ -0.65
NUP54-202ENST00000502850 FHL1Q13642 323 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 SF3A2Q15428 464 aaKnown RBP10.98□□□□□ -0.65
NUP54-202ENST00000502850 TAB1Q15750 504 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 RPL22L1Q6P5R6 122 aaKnown RBP10.98□□□□□ -0.65
NUP54-202ENST00000502850 PLET1Q6UQ28 207 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 BAIAP2L2Q6UXY1 529 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 NCCRP1Q6ZVX7 275 aaPredicted RBP10.98□□□□□ -0.65
NUP54-202ENST00000502850 PXKQ7Z7A4 578 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 PLXDC1Q8IUK5 500 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 SLC35F2Q8IXU6 374 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 ZNF687Q8N1G0 1237 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 CYB561A3Q8NBI2 242 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 OR14A16Q8NHC5 309 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 ABHD4Q8TB40 342 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 SMIM19Q96E16 107 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 FRMD6Q96NE9 622 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 TIMP4Q99727 224 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 NRIP3Q9NQ35 241 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 WDR70Q9NW82 654 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 RBFOX1Q9NWB1 397 aaKnown RBP10.98□□□□□ -0.65
NUP54-202ENST00000502850 LRIT1Q9P2V4 623 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 TEKT2Q9UIF3 430 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 IER3IP1Q9Y5U9 82 aa10.98□□□□□ -0.65
NUP54-202ENST00000502850 IGHV5-51A0A0C4DH38 117 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 HMX3A6NHT5 357 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 OGG1O15527 345 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 ZNF264O43296 627 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 LRRTM2O43300 516 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 ADAM11O75078 769 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 SC5DO75845 299 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 CLPSP04118 112 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 HIST1H1CP16403 213 aaKnown RBP10.97□□□□□ -0.65
NUP54-202ENST00000502850 DDOSTP39656 456 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 DIO1P49895 249 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 SLC25A1P53007 311 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 GFERP55789 205 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 CAV3P56539 151 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 HSD11B2P80365 405 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 SLC3A1Q07837 685 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 ERV3-1Q14264 604 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 ELAVL1Q15717 326 aaKnown RBP10.97□□□□□ -0.65
NUP54-202ENST00000502850 CDONQ4KMG0 1287 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 EMC4Q5J8M3 183 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 IDNKQ5T6J7 187 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 FNDC7Q5VTL7 733 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 FCRLBQ6BAA4 426 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 SFXN4Q6P4A7 337 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 B3GLCTQ6Y288 498 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 TRILQ7L0X0 811 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 CEACAM19Q7Z692 300 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 KMT5CQ86Y97 462 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 SHISA5Q8N114 240 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 FAM160A2Q8N612 972 aaPredicted RBP10.97□□□□□ -0.65
NUP54-202ENST00000502850 SDR9C7Q8NEX9 313 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 OR4C3Q8NH37 302 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 OR4K13Q8NH42 304 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 SNX33Q8WV41 574 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 SENP5Q96HI0 755 aaPredicted RBP10.97□□□□□ -0.65
NUP54-202ENST00000502850 SHDQ96IW2 340 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 LCORQ96JN0 433 aaPredicted RBP10.97□□□□□ -0.65
NUP54-202ENST00000502850 DCLRE1CQ96SD1 692 aaKnown RBP10.97□□□□□ -0.65
NUP54-202ENST00000502850 C11orf54Q9H0W9 315 aaPredicted RBP10.97□□□□□ -0.65
NUP54-202ENST00000502850 RNF121Q9H920 327 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 LANCL2Q9NS86 450 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 ABRACLQ9P1F3 81 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 EXTL2Q9UBQ6 330 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 ZMIZ1Q9ULJ6 1067 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 MOKQ9UQ07 419 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 HIF3AQ9Y2N7 669 aa10.97□□□□□ -0.65
NUP54-202ENST00000502850 TP53BP1Q12888 1972 aaPredicted RBP10.96□□□□□ -0.65
NUP54-202ENST00000502850 MEIOCA2RUB1 952 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 SMIM30A4D0T7 59 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 MCIDASD6RGH6 385 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 NCR1O76036 304 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 PYCR1P32322 319 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 SLC37A1P57057 533 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 GPLD1P80108 840 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 RPL6Q02878 288 aaKnown RBP10.96□□□□□ -0.65
NUP54-202ENST00000502850 SKP2Q13309 424 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 CDK5R1Q15078 307 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 NNATQ16517 81 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 SPATC1Q76KD6 591 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 ATG4DQ86TL0 474 aaPredicted RBP10.96□□□□□ -0.65
NUP54-202ENST00000502850 JAZF1Q86VZ6 243 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 TMEM151BQ8IW70 566 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 GPR135Q8IZ08 494 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 DTWD2Q8NBA8 298 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 PHOSPHO1Q8TCT1 267 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 PGLYRP3Q96LB9 341 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 MNTQ99583 582 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 OR2B2Q9GZK3 357 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 LAT2Q9GZY6 243 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 SPRTNQ9H040 489 aaPredicted RBP10.96□□□□□ -0.65
NUP54-202ENST00000502850 INIPQ9NRY2 104 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 CYSLTR2Q9NS75 346 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 ST6GALNAC2Q9UJ37 374 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 SLCO1B1Q9Y6L6 691 aa10.96□□□□□ -0.65
NUP54-202ENST00000502850 CLCA3PQ9Y6N3 262 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms