RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 LRRC61Q9BV99 259 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 ABCG5Q9H222 651 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 Q9N2J8 555 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 PRTFDC1Q9NRG1 225 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 GPR27Q9NS67 375 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 ACOXLQ9NUZ1 547 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 COPS3Q9UNS2 423 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 CACNA1IQ9P0X4 2223 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 PCDH15Q96QU1 1955 aa9.04□□□□□ -0.96
CLIP1-204ENST00000501271 A0A087WUJ7 227 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 SERINC4A6NH21 518 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 SMLR1H3BR10 107 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 OGG1O15527 345 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 SELENOFO60613 162 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 SOX30O94993 753 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 OR2T7P0C7T2 308 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 SNRPBP14678 240 aaKnown RBP9.03□□□□□ -0.96
CLIP1-204ENST00000501271 AHCYP23526 432 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 EVI2BP34910 448 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 RPL4P36578 427 aaKnown RBP9.03□□□□□ -0.96
CLIP1-204ENST00000501271 LTBRP36941 435 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 CAPZA2P47755 286 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 GPR143P51810 404 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 NUBP1P53384 320 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 ACTA2P62736 377 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 ACTG2P63267 376 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 FAPQ12884 760 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 GAS6Q14393 721 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 CDONQ4KMG0 1287 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 CEP78Q5JTW2 689 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 TIGD3Q6B0B8 471 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 Q6ZS52 159 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 DNAJC5GQ8N7S2 189 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 POMGNT2Q8NAT1 580 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 OR2T27Q8NH04 317 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 HSD17B8Q92506 261 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 C3orf49Q96BT1 292 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 RASD2Q96D21 266 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 LRFN5Q96NI6 719 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 NECTIN4Q96NY8 510 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 OR14A2Q96R54 314 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 MAP3K3Q99759 626 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 GNG8Q9UK08 70 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 OR10H1Q9Y4A9 318 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 TP53BP1Q12888 1972 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-204ENST00000501271 OR6C68A6NDL8 312 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 C4orf47A7E2U8 309 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 EFCAB7A8K855 629 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-204ENST00000501271 CLPSP04118 112 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 SIRPAP78324 504 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 SLC36A2Q495M3 483 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 RNASE12Q5GAN4 147 aaKnown RBP9.03□□□□□ -0.96
CLIP1-204ENST00000501271 PYHIN1Q6K0P9 492 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 ESPNLQ6ZVH7 1005 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 ZNF595Q8IYB9 648 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 SYS1Q8N2H4 156 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 BMPERQ8N8U9 685 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 GATSQ8NAP1 163 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 NPEPL1Q8NDH3 523 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 OR14A16Q8NHC5 309 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 DDOQ99489 341 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 PDCD1LG2Q9BQ51 273 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 G6PC3Q9BUM1 346 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 GPR174Q9BXC1 333 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 OR10A5Q9H207 317 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 SLA2Q9H6Q3 261 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 C8orf33Q9H7E9 229 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-204ENST00000501271 MRPS33Q9Y291 106 aaKnown RBP9.03□□□□□ -0.96
CLIP1-204ENST00000501271 TMEM184BQ9Y519 407 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-204ENST00000501271 NPFFR2Q9Y5X5 522 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 CACNG2Q9Y698 323 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 MAU2Q9Y6X3 613 aa9.03□□□□□ -0.96
CLIP1-204ENST00000501271 IGKV1D-42A0A075B6H8 117 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 TRAV1-2A0A0B4J238 106 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-204ENST00000501271 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-204ENST00000501271 NOTOA8MTQ0 251 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 SERPINI2O75830 405 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 EPXP11678 715 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 SPI1P17947 270 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 ERP29P30040 261 aaKnown RBP9.02□□□□□ -0.97
CLIP1-204ENST00000501271 PSMB10P40306 273 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 GZMKP49863 264 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 DIO1P49895 249 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 CCR5P51681 352 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 GBX2P52951 348 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-204ENST00000501271 RPS4XP62701 263 aaKnown RBP9.02□□□□□ -0.97
CLIP1-204ENST00000501271 ERVK-25P63136 954 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 FUT7Q11130 342 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 PON3Q15166 354 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 SNAP47Q5SQN1 464 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 DPY19L2P2Q6ZN68 376 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 KRT74Q7RTS7 529 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 LIX1LQ8IVB5 337 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 CMIPQ8IY22 773 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 ZSCAN1Q8NBB4 408 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 OR6K6Q8NGW6 343 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 ZFAND1Q8TCF1 268 aa9.02□□□□□ -0.97
CLIP1-204ENST00000501271 SNX33Q8WV41 574 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms