RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, human

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFF3-215	ENST00000498090	MAB21L1	Q13394	359 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	GGTLC2	Q14390	218 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	ZNF57	Q68EA5	555 aa	Predicted RBP	11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	DMKN	Q6E0U4	476 aa	Predicted RBP	11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	SFXN4	Q6P4A7	337 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	GUSBP11	Q6P575	273 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	OOSP2	Q86WS3	158 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	CA13	Q8N1Q1	262 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	ADAMTS18	Q8TE60	1221 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	OIT3	Q8WWZ8	545 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	SMPDL3B	Q92485	455 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	CCDC74A	Q96AQ1	378 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	RNF31	Q96EP0	1072 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	DMRTB1	Q96MA1	342 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	CCNL2	Q96S94	520 aa	Predicted RBP	11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	HDHD2	Q9H0R4	259 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	ADGRL4	Q9HBW9	690 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	PARD6A	Q9NPB6	346 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	ATP13A2	Q9NQ11	1180 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	ENAM	Q9NRM1	1142 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	COPZ2	Q9P299	210 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	NLK	Q9UBE8	527 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	KCNE5	Q9UJ90	142 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	ALG5	Q9Y673	324 aa		11.43	□□□□□ -0.58
AFF3-215	ENST00000498090	LOC105369274	A0A096LPK9	316 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	LOC102723532	A0A0G2JNH3	316 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	CENPVL1	A0A0U1RR11	272 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	INMT-MINDY4	F8WBC2	141 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	CDX4	O14627	284 aa	Predicted RBP	11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	GFRA3	O60609	400 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	PPM1B	O75688	479 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	GATB	O75879	557 aa	Known RBP	11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	OR2T7	P0C7T2	308 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	ZNF806	P0C7X5	589 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	ZNF883	P0CG24	379 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	PVR	P15151	417 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	ARSB	P15848	533 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	GLB1	P16278	677 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	NOS3	P29474	1203 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	GZMK	P49863	264 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	GPR143	P51810	404 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	OR1D5	P58170	312 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	CD83	Q01151	205 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	SPEM2	Q0P670	501 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	NR0B2	Q15466	257 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	ISX	Q2M1V0	245 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	CCDC58	Q4VC31	144 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	ULK3	Q6PHR2	472 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	ARL9	Q6T311	187 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	CEACAM19	Q7Z692	300 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	OR4N4	Q8N0Y3	316 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	CSNK1A1L	Q8N752	337 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	OR13C2	Q8NGS9	318 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	OR2T27	Q8NH04	317 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	C4orf36	Q96KX1	117 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	ZNF578	Q96N58	590 aa	Predicted RBP	11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	C7orf50	Q9BRJ6	194 aa	Known RBP	11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	THAP7	Q9BT49	309 aa	Predicted RBP	11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	G6PC3	Q9BUM1	346 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	MALT1	Q9UDY8	824 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	POMT2	Q9UKY4	750 aa		11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.42	□□□□□ -0.58
AFF3-215	ENST00000498090	IGHV1OR21-1	A0A087WYE8	117 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	OR6C70	A6NIJ9	312 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	OGG1	O15527	345 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	LDB3	O75112	727 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	DHFR	P00374	187 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	CSF2RB	P32927	897 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	THBS2	P35442	1172 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	GBX2	P52951	348 aa	Predicted RBP	11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	SLC16A1	P53985	500 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	EPHA4	P54764	986 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	GFER	P55789	205 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	CFHR1	Q03591	330 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	ZNF85	Q03923	595 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	HSF2	Q03933	536 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	MRPL28	Q13084	256 aa	Known RBP	11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	EFR3A	Q14156	821 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	SLC35D3	Q5M8T2	416 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	NKAIN2	Q5VXU1	208 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	LINC00114	Q6XXX2	140 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	THSD4	Q6ZMP0	1018 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	DBX2	Q6ZNG2	339 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	YIPF7	Q8N8F6	280 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	HAVCR2	Q8TDQ0	301 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	UPRT	Q96BW1	309 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	FYTTD1	Q96QD9	318 aa	Known RBP	11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	CCDC3	Q9BQI4	270 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	WAC	Q9BTA9	647 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	OR51V1	Q9H2C8	321 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	ZCCHC4	Q9H5U6	513 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	MKKS	Q9NPJ1	570 aa	Predicted RBP	11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	MEPE	Q9NQ76	525 aa	Predicted RBP	11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	ACOXL	Q9NUZ1	547 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	PTTG3P	Q9NZH4	202 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	TEKT2	Q9UIF3	430 aa		11.41	□□□□□ -0.58
AFF3-215	ENST00000498090	HEATR5B	Q9P2D3	2071 aa		11.4	□□□□□ -0.58

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