RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CRYGSP22914 178 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 DIO1P49895 249 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 KEAP1Q14145 624 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 LRRC23Q53EV4 343 aaPredicted RBP13.65□□□□□ -0.22
NUP50-219ENST00000497960 ZNF311Q5JNZ3 666 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 SAMD4BQ5PRF9 694 aaKnown RBP13.65□□□□□ -0.22
NUP50-219ENST00000497960 MRPL2Q5T653 305 aaKnown RBP13.65□□□□□ -0.22
NUP50-219ENST00000497960 ANKRD34AQ69YU3 496 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 PAMR1Q6UXH9 720 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 PATL1Q86TB9 770 aaKnown RBP13.65□□□□□ -0.22
NUP50-219ENST00000497960 RNF148Q8N7C7 305 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 ZHX1-C8orf76Q96EF9 292 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 ZC3HAV1LQ96H79 300 aaKnown RBP13.65□□□□□ -0.22
NUP50-219ENST00000497960 ARMC7Q9H6L4 198 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 PLEKHF2Q9H8W4 249 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 C6orf203Q9P0P8 240 aaPredicted RBP13.65□□□□□ -0.22
NUP50-219ENST00000497960 GMPR2Q9P2T1 348 aaKnown RBP13.65□□□□□ -0.22
NUP50-219ENST00000497960 ZNF232Q9UNY5 417 aa13.65□□□□□ -0.22
NUP50-219ENST00000497960 PRRC2AP48634 2157 aaKnown RBP13.65□□□□□ -0.22
NUP50-219ENST00000497960 PRORSD1PA6NEY8 169 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 SERPINB7O75635 380 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 RAF1P04049 648 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 TCN1P20061 433 aaPredicted RBP13.64□□□□□ -0.23
NUP50-219ENST00000497960 CLK1P49759 484 aaKnown RBP13.64□□□□□ -0.23
NUP50-219ENST00000497960 POLR2HP52434 150 aaKnown RBP13.64□□□□□ -0.23
NUP50-219ENST00000497960 PCBP3P57721 371 aaKnown RBP13.64□□□□□ -0.23
NUP50-219ENST00000497960 PLAURQ03405 335 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 RASGEF1BQ0VAM2 473 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 VEZF1Q14119 521 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 ZSWIM7Q19AV6 140 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 DNAL1Q4LDG9 190 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 RNF220Q5VTB9 566 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 STAC2Q6ZMT1 411 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 NUFIP2Q7Z417 695 aaKnown RBP13.64□□□□□ -0.23
NUP50-219ENST00000497960 ARMC8Q8IUR7 673 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 SLC26A7Q8TE54 656 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 PIK3IP1Q96FE7 263 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 CDRT15Q96T59 188 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 FOXC2Q99958 501 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 BCO1Q9HAY6 547 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 SLC13A4Q9UKG4 626 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 GPR52Q9Y2T5 361 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 HDGFL3Q9Y3E1 203 aa13.64□□□□□ -0.23
NUP50-219ENST00000497960 ROS1P08922 2347 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 TMED7-TICAM2A0A0A6YYA0 188 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 FAAHO00519 579 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 AP3D1O14617 1153 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 SMAD9O15198 467 aaKnown RBP13.63□□□□□ -0.23
NUP50-219ENST00000497960 CYTIPO60759 359 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 ADAM11O75078 769 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 FESP07332 822 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 CCNA2P20248 432 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 PSMB1P20618 241 aaKnown RBP13.63□□□□□ -0.23
NUP50-219ENST00000497960 SLC1A3P43003 542 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 EPS8Q12929 822 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 BNIP1Q12981 228 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 C6orf89Q6UWU4 347 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 TFAP2EQ6VUC0 442 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 ADGRG3Q86Y34 549 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 STEAP2Q8NFT2 490 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 DDIT4LQ96D03 193 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 PSD2Q9BQI7 771 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 HDHD5Q9BXW7 423 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 ACTR6Q9GZN1 396 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 OR10A4Q9H209 315 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 C1orf21Q9H246 121 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 OSGIN1Q9UJX0 560 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 PRDM4Q9UKN5 801 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 TMED7Q9Y3B3 224 aa13.63□□□□□ -0.23
NUP50-219ENST00000497960 FREM1Q5H8C1 2179 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 MED13LQ71F56 2210 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 CDHR4A6H8M9 788 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 ZNF724A8MTY0 619 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 DEFB108AA8MXU0 73 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 EBAG9O00559 213 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 CXCR6O00574 342 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 GYG2O15488 501 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 ZNF208O43345 1280 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 DNPH1O43598 174 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 GMNNO75496 209 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 PMS2P2O95744 297 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 TACR3P29371 465 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 PRKAR1BP31321 381 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 RASSF2P50749 326 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 MAP2K6P52564 334 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 COPZ1P61923 177 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 DHRS4L2Q6PKH6 230 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 CCDC121Q6ZUS5 278 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 CCDC80Q76M96 950 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 GALNT5Q7Z7M9 940 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 CXorf67Q86X51 503 aaPredicted RBP13.62□□□□□ -0.23
NUP50-219ENST00000497960 SMYD1Q8NB12 490 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 FAM156AQ8NDB6 213 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 BHLHE22Q8NFJ8 381 aaPredicted RBP13.62□□□□□ -0.23
NUP50-219ENST00000497960 FAM162AQ96A26 154 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 MBD6Q96DN6 1003 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 ARL5BQ96KC2 179 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 OR11A1Q9GZK7 315 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 RLIMQ9NVW2 624 aa13.62□□□□□ -0.23
NUP50-219ENST00000497960 TAS2R1Q9NYW7 299 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms