RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 FFAR1O14842 300 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 ADAMDEC1O15204 470 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 WDR1O75083 606 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 LDLRP01130 860 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 THY1P04216 161 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 HOXD4P09016 255 aaPredicted RBP17.99■□□□□ 0.47
CTSD-206ENST00000497544 EIF1AXP47813 144 aaKnown RBP17.99■□□□□ 0.47
CTSD-206ENST00000497544 TPD52P55327 224 aaPredicted RBP17.99■□□□□ 0.47
CTSD-206ENST00000497544 CLDN15P56746 228 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 SMIM11AP58511 58 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 TRAM2Q15035 370 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 EIF2S3LQ2VIR3 472 aaKnown RBP17.99■□□□□ 0.47
CTSD-206ENST00000497544 IQCCQ4KMZ1 466 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 EMC4Q5J8M3 183 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 C5orf46Q6UWT4 87 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 GGNQ86UU5 652 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 DOLPP1Q86YN1 238 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 NKAIN4Q8IVV8 208 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 C10orf67Q8IYJ2 551 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 OFCC1Q8IZS5 231 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 ZPLD1Q8TCW7 415 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 HS6ST2Q96MM7 605 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 CHID1Q9BWS9 393 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 TP63Q9H3D4 680 aaPredicted RBP17.99■□□□□ 0.47
CTSD-206ENST00000497544 YY1AP1Q9H869 796 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 NMNAT1Q9HAN9 279 aaPredicted RBP17.99■□□□□ 0.47
CTSD-206ENST00000497544 TIGARQ9NQ88 270 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 CCM2LQ9NUG4 571 aaPredicted RBP17.99■□□□□ 0.47
CTSD-206ENST00000497544 SH3BGRL2Q9UJC5 107 aa17.99■□□□□ 0.47
CTSD-206ENST00000497544 ZC3H12DA2A288 527 aaKnown RBP17.98■□□□□ 0.47
CTSD-206ENST00000497544 SULT2B1O00204 365 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 CXCL13O43927 109 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 LYPD3O95274 346 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 AHSA1O95433 338 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 MT-ND1P03886 318 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 H1F0P07305 194 aaKnown RBP17.98■□□□□ 0.47
CTSD-206ENST00000497544 PTGER4P35408 488 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 ACTR3P61158 418 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 CCNIQ14094 377 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 KPNB1Q14974 876 aaKnown RBP17.98■□□□□ 0.47
CTSD-206ENST00000497544 CTU2Q2VPK5 515 aaKnown RBP17.98■□□□□ 0.47
CTSD-206ENST00000497544 LINC00114Q6XXX2 140 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 TMPPEQ6ZT21 453 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 PIK3C3Q8NEB9 887 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 OR10D3Q8NH80 312 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 PRR7Q8TB68 274 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 DNAJA3Q96EY1 480 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 ARL5BQ96KC2 179 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 EPYCQ99645 322 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 TUBA1CQ9BQE3 449 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 PRSS27Q9BQR3 290 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 TMEM43Q9BTV4 400 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 ERRFI1Q9UJM3 462 aaPredicted RBP17.98■□□□□ 0.47
CTSD-206ENST00000497544 POLEQ07864 2286 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 MYO7BQ6PIF6 2116 aa17.98■□□□□ 0.47
CTSD-206ENST00000497544 ANKRD65E5RJM6 399 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 PRSS23O95084 383 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 GADD45GO95257 159 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 ACVR2AP27037 513 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 MAGEA2P43356 314 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 OR2B6P58173 313 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 CSNK2A1P68400 391 aaPredicted RBP17.97■□□□□ 0.47
CTSD-206ENST00000497544 SPIBQ01892 262 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 MYBPHQ13203 477 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 C1orf140Q5VVS0 124 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 WDR88Q6ZMY6 472 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 RRM2BQ7LG56 351 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 P3H2Q8IVL5 708 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 ADGRG7Q96K78 797 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 TRIB1Q96RU8 372 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 TAPBPLQ9BX59 468 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 ANKRD19PQ9H560 264 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 TINAGQ9UJW2 476 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 TRAPPC4Q9Y296 219 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 TESMINQ9Y4I5 508 aa17.97■□□□□ 0.47
CTSD-206ENST00000497544 CLCA1A8K7I4 914 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 OR2T1O43869 369 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 SYNGR4O95473 234 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 PMS2P2O95744 297 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 CST1P01037 141 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 PTNP21246 168 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 RRM2P31350 389 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 IDUAP35475 653 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 RBM34P42696 430 aaKnown RBP17.96■□□□□ 0.47
CTSD-206ENST00000497544 CA7P43166 264 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 DIO1P49895 249 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 RAC3P60763 192 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 EGR4Q05215 589 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 C1orf185Q5T7R7 199 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 PPP4R4Q6NUP7 873 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 PAPD5Q8NDF8 572 aaKnown RBP17.96■□□□□ 0.47
CTSD-206ENST00000497544 TMEM239Q8WW34 195 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 MARVELD3Q96A59 401 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 PRRG4Q9BZD6 226 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 COQ10BQ9H8M1 238 aa17.96■□□□□ 0.47
CTSD-206ENST00000497544 IGKV1D-42A0A075B6H8 117 aa17.95■□□□□ 0.46
CTSD-206ENST00000497544 TRAV36DV7A0A075B6V5 113 aa17.95■□□□□ 0.46
CTSD-206ENST00000497544 A0A1W2PRQ8 180 aa17.95■□□□□ 0.46
CTSD-206ENST00000497544 GNGT2O14610 69 aa17.95■□□□□ 0.46
CTSD-206ENST00000497544 NPIPB7O75200 414 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms