RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ZNF703Q9H7S9 590 aaPredicted RBP7.82□□□□□ -1.16
U2AF1-212ENST00000496462 ASF1BQ9NVP2 202 aa7.82□□□□□ -1.16
U2AF1-212ENST00000496462 SLC7A8Q9UHI5 535 aa7.82□□□□□ -1.16
U2AF1-212ENST00000496462 CROCCQ5TZA2 2017 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 C7orf72A4D263 438 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 PYCARD-AS1I3L0S3 204 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 FRS3O43559 492 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 PMP22Q01453 160 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 LCN1P1Q5VSP4 162 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 C6orf89Q6UWU4 347 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 OR5M9Q8NGP3 310 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 MOSPD2Q8NHP6 518 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 WNT2BQ93097 391 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 APH1AQ96BI3 265 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 ARHGDIGQ99819 225 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 ENKD1Q9H0I2 346 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 INIPQ9NRY2 104 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 FOXD3Q9UJU5 478 aaPredicted RBP7.81□□□□□ -1.16
U2AF1-212ENST00000496462 OSGIN1Q9UJX0 560 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 CLDN16Q9Y5I7 305 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 MDC1Q14676 2089 aaKnown RBP7.81□□□□□ -1.16
U2AF1-212ENST00000496462 SDK2Q58EX2 2172 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 ADAMTS20P59510 1910 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 IGLV3-32A0A0A0MS00 114 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 ASPDHA6ND91 283 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 SLC19A2O60779 497 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 NDUFB2O95178 105 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 TMIGD3P0DMS9 266 aaPredicted RBP7.81□□□□□ -1.16
U2AF1-212ENST00000496462 CD47Q08722 323 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 KPNB1Q14974 876 aaKnown RBP7.81□□□□□ -1.16
U2AF1-212ENST00000496462 TAF13Q15543 124 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 BICRALQ6AI39 1079 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 KRT80Q6KB66 452 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 MSRB3Q8IXL7 192 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 OR6S1Q8NH40 331 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 CDADC1Q9BWV3 514 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 UCK2Q9BZX2 261 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 ZNF823P16415 610 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 PRKCAP17252 672 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 SKP2Q13309 424 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 PRSS53Q2L4Q9 553 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 GXYLT1Q4G148 440 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 TTC23Q5W5X9 447 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 FAM219BQ5XKK7 198 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 OR5J2Q8NH18 312 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 CANT1Q8WVQ1 401 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 SNRNP40Q96DI7 357 aaKnown RBP7.81□□□□□ -1.16
U2AF1-212ENST00000496462 NRBF2Q96F24 287 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 PIGMQ9H3S5 423 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 FKRPQ9H9S5 495 aa7.81□□□□□ -1.16
U2AF1-212ENST00000496462 ZFP36L2P47974 494 aaKnown RBP7.8□□□□□ -1.16
U2AF1-212ENST00000496462 SIRPAP78324 504 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 PIN1Q13526 163 aaPredicted RBP7.8□□□□□ -1.16
U2AF1-212ENST00000496462 VTCN1Q7Z7D3 282 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 CLIP4Q8N3C7 705 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 OR4K5Q8NGD3 323 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 OR6T1Q8NGN1 323 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 BPIFA2Q96DR5 249 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 FRMD6Q96NE9 622 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 HDHD5Q9BXW7 423 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 HES7Q9BYE0 225 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 GP6Q9HCN6 339 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 CHST11Q9NPF2 352 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 CCM2LQ9NUG4 571 aaPredicted RBP7.8□□□□□ -1.16
U2AF1-212ENST00000496462 RLIMQ9NVW2 624 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 FBXO34Q9NWN3 711 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 SAC3D1A6NKF1 404 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 WNT11O96014 354 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 ADAP00813 363 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 CSNK1A1P48729 337 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 ERFP50548 548 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 MLLT10P55197 1068 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 PCBP3P57721 371 aaKnown RBP7.8□□□□□ -1.16
U2AF1-212ENST00000496462 SELENOVP59797 346 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 TOP3AQ13472 1001 aaPredicted RBP7.8□□□□□ -1.16
U2AF1-212ENST00000496462 HYAL4Q2M3T9 481 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 ZNF468Q5VIY5 522 aaPredicted RBP7.8□□□□□ -1.16
U2AF1-212ENST00000496462 HOXB13Q92826 284 aaPredicted RBP7.8□□□□□ -1.16
U2AF1-212ENST00000496462 INTS12Q96CB8 462 aaKnown RBP7.8□□□□□ -1.16
U2AF1-212ENST00000496462 RNF121Q9H920 327 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 ZNF229Q9UJW7 825 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 ENO4A6NNW6 628 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 C11orf98E9PRG8 122 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 J3QKU1 62 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 MPZL2O60487 215 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 IGKV1D-16P01601 117 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 IGHG1P01857 330 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 ZNF3P17036 446 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 TLE1Q04724 770 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 CD226Q15762 336 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 PLPPR5Q32ZL2 321 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 ALG10Q5BKT4 473 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 PGM2L1Q6PCE3 622 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 NRMQ8IXM6 262 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 ALDH16A1Q8IZ83 802 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 LSMEM1Q8N8F7 131 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 OR10D3Q8NH80 312 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 FANK1Q8TC84 345 aa7.8□□□□□ -1.16
U2AF1-212ENST00000496462 ADAD1Q96M93 576 aaKnown RBP7.8□□□□□ -1.16
U2AF1-212ENST00000496462 OXGR1Q96P68 337 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms