RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 UGT2A1Q9Y4X1 527 aa12.23□□□□□ -0.45
PTPRF-215ENST00000496447 A0A1W2PQL4 384 aaPredicted RBP12.23□□□□□ -0.45
PTPRF-215ENST00000496447 SERINC4A6NH21 518 aa12.23□□□□□ -0.45
PTPRF-215ENST00000496447 SORBS2O94875 1100 aaKnown RBP12.23□□□□□ -0.45
PTPRF-215ENST00000496447 PLAG1Q6DJT9 500 aa12.23□□□□□ -0.45
PTPRF-215ENST00000496447 FAM57BQ71RH2 274 aa12.23□□□□□ -0.45
PTPRF-215ENST00000496447 CBLL1Q75N03 491 aa12.23□□□□□ -0.45
PTPRF-215ENST00000496447 OR11L1Q8NGX0 322 aa12.23□□□□□ -0.45
PTPRF-215ENST00000496447 PIGQQ9BRB3 760 aa12.23□□□□□ -0.45
PTPRF-215ENST00000496447 CALHM2Q9HA72 323 aa12.23□□□□□ -0.45
PTPRF-215ENST00000496447 GFOD1Q9NXC2 390 aa12.23□□□□□ -0.45
PTPRF-215ENST00000496447 GHRLQ9UBU3 117 aa12.23□□□□□ -0.45
PTPRF-215ENST00000496447 CBX7O95931 251 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 SEC61A1P61619 476 aaKnown RBP12.22□□□□□ -0.45
PTPRF-215ENST00000496447 C18orf63Q68DL7 685 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 MEPCEQ7L2J0 689 aaKnown RBP12.22□□□□□ -0.45
PTPRF-215ENST00000496447 ACBD4Q8NC06 268 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 IL1F10Q8WWZ1 152 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 UNKLQ9H9P5 680 aaKnown RBP12.22□□□□□ -0.45
PTPRF-215ENST00000496447 RANGRFQ9HD47 186 aaPredicted RBP12.22□□□□□ -0.45
PTPRF-215ENST00000496447 WASH6PQ9NQA3 447 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 TP53TG5Q9Y2B4 290 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 SLC22A7Q9Y694 548 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 A0A1B0GX78 115 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 TCRBV3S1A0A5B6 114 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 HMGA1P17096 107 aaKnown RBP12.22□□□□□ -0.45
PTPRF-215ENST00000496447 C17orf67Q0P5P2 114 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 METTL11BQ5VVY1 283 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 C5orf46Q6UWT4 87 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 CLEC14AQ86T13 490 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 C4orf36Q96KX1 117 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 EIF5A2Q9GZV4 153 aaKnown RBP12.22□□□□□ -0.45
PTPRF-215ENST00000496447 APMAPQ9HDC9 416 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 PRDM9Q9NQV7 894 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 OR14J1Q9UGF5 321 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 PLEKHM1Q9Y4G2 1056 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 CLDN24A6NM45 220 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 UTS2O95399 124 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 S100PP25815 95 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 P2RY14Q15391 338 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 SLC22A6Q4U2R8 563 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 SVBPQ8N300 66 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 GTPBP8Q8N3Z3 284 aaPredicted RBP12.22□□□□□ -0.45
PTPRF-215ENST00000496447 TEX19Q8NA77 164 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 OR4K15Q8NH41 348 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 SLC46A1Q96NT5 459 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 MS4A8Q9BY19 250 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 B4DXG7 233 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 TNFRSF10CO14798 259 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 ALOX12BO75342 701 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 EFNA3P52797 238 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 RAB31Q13636 194 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 IFI44Q8TCB0 444 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 UBTD2Q8WUN7 234 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 ASB17Q8WXJ9 295 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 MUL1Q969V5 352 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 CCDC74AQ96AQ1 378 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 DHRS9Q9BPW9 319 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 PBDC1Q9BVG4 233 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 OR51J1Q9H342 316 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 MYH3P11055 1940 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 C2orf72A6NCS6 295 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 SHISA7A6NL88 538 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 TIMM8AO60220 97 aaPredicted RBP12.22□□□□□ -0.45
PTPRF-215ENST00000496447 ARAFP10398 606 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 DDOSTP39656 456 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 CARD18P57730 90 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 PDE7AQ13946 482 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 LTB4RQ15722 352 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 OR7E24Q6IFN5 339 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 TMEM64Q6YI46 380 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 IDO2Q6ZQW0 420 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 MED25Q71SY5 747 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 VRK3Q8IV63 474 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 SGPP2Q8IWX5 399 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 OR1S1Q8NH92 325 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 TMEM163Q8TC26 289 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 SLC41A2Q96JW4 573 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 OCEL1Q9H607 264 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 MBNL1Q9NR56 388 aaKnown RBP12.22□□□□□ -0.45
PTPRF-215ENST00000496447 ZFP57Q9NU63 452 aa12.22□□□□□ -0.45
PTPRF-215ENST00000496447 TFP02787 698 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 TPOP07202 933 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 TRAPPC2P0DI81 140 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 TRAPPC2BP0DI82 140 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 CD53P19397 219 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 KCTD11Q693B1 232 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 C6orf15Q6UXA7 325 aaPredicted RBP12.21□□□□□ -0.45
PTPRF-215ENST00000496447 B3GNT7Q8NFL0 401 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 OR13F1Q8NGS4 319 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 CNOT9Q92600 299 aaKnown RBP12.21□□□□□ -0.45
PTPRF-215ENST00000496447 FOXRED1Q96CU9 486 aaPredicted RBP12.21□□□□□ -0.45
PTPRF-215ENST00000496447 PHB2Q99623 299 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 MRI1Q9BV20 369 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 ELOVL3Q9HB03 270 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 MYH7P12883 1935 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 A0A087WUU8 490 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 OR7A17O14581 309 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 SERPINA2P20848 420 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 ENPP1P22413 925 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms