RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 TRIM16LQ309B1 348 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 NKAIN1Q4KMZ8 207 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 KLHL26Q53HC5 615 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 AADACL4Q5VUY2 407 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 PEAR1Q5VY43 1037 aaPredicted RBP6.34□□□□□ -1.39
USP39-219ENST00000496047 PLBD1Q6P4A8 553 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 MZT2AQ6P582 158 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 TSSK4Q6SA08 328 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 KIRREL2Q6UWL6 708 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 PAMR1Q6UXH9 720 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 DPY19L2P2Q6ZN68 376 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 ZAR1Q86SH2 424 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 MEX3DQ86XN8 651 aaKnown RBP6.34□□□□□ -1.39
USP39-219ENST00000496047 CPOQ8IVL8 374 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 C1orf210Q8IVY1 113 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 PRSS58Q8IYP2 241 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 SLC15A4Q8N697 577 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 EID2Q8N6I1 236 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 FAM71CQ8NEG0 241 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 OR4N2Q8NGD1 307 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 OR51G2Q8NGK0 314 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 OR51A7Q8NH64 312 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 IFI44Q8TCB0 444 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 SLC22A8Q8TCC7 542 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 STT3BQ8TCJ2 826 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.34□□□□□ -1.39
USP39-219ENST00000496047 RPL3LQ92901 407 aaKnown RBP6.34□□□□□ -1.39
USP39-219ENST00000496047 OMA1Q96E52 524 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 ZC3H10Q96K80 434 aaKnown RBP6.34□□□□□ -1.39
USP39-219ENST00000496047 FRMD6Q96NE9 622 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 ERMAPQ96PL5 475 aaPredicted RBP6.34□□□□□ -1.39
USP39-219ENST00000496047 ZNF426Q9BUY5 554 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 ASPNQ9BXN1 380 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 VN1R1Q9GZP7 353 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 OR51E2Q9H255 320 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 FKRPQ9H9S5 495 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 HINT3Q9NQE9 182 aaKnown RBP6.34□□□□□ -1.39
USP39-219ENST00000496047 NANSQ9NR45 359 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 SDHAF3Q9NRP4 125 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 TAS2R16Q9NYV7 291 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 FLRT3Q9NZU0 649 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 DAPK2Q9UIK4 370 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 POLHQ9Y253 713 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 TMEM184BQ9Y519 407 aaPredicted RBP6.34□□□□□ -1.39
USP39-219ENST00000496047 NOX1Q9Y5S8 564 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 XIRP2A4UGR9 3374 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 RIF1Q5UIP0 2472 aaKnown RBP6.34□□□□□ -1.4
USP39-219ENST00000496047 KIF26BQ2KJY2 2108 aa6.34□□□□□ -1.4
USP39-219ENST00000496047 FAM208BQ5VWN6 2430 aa6.34□□□□□ -1.4
USP39-219ENST00000496047 ZNF292O60281 2723 aa6.34□□□□□ -1.4
USP39-219ENST00000496047 DCHS1Q96JQ0 3298 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 REV3LO60673 3130 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 IGLV3-12A0A075B6K2 115 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 IGHV5-10-1A0A0J9YXX1 117 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 OR6C70A6NIJ9 312 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 C12orf71A8MTZ7 269 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 ALG1L2C9J202 215 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 TMX2-CTNND1H3BSU7 103 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 HRKO00198 91 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 IMPA2O14732 288 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 PHYHO14832 338 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 RGS5O15539 181 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 ICOSLGO75144 302 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 ALOX12BO75342 701 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 RGS9O75916 674 aaPredicted RBP6.33□□□□□ -1.4
USP39-219ENST00000496047 LYPD3O95274 346 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 MT-ATP6P00846 226 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 APOA1P02647 267 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 CLPSP04118 112 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 INHBBP09529 407 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 ZGLP1P0C6A0 271 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 GIMD1P0DJR0 217 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 APEHP13798 732 aaKnown RBP6.33□□□□□ -1.4
USP39-219ENST00000496047 CD53P19397 219 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 FUT1P19526 365 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 PTNP21246 168 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 F8A1P23610 371 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 CCKBRP32239 447 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 ETV5P41161 510 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 CENPAP49450 140 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 ETV1P50549 477 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 BMXP51813 675 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 POLR2HP52434 150 aaKnown RBP6.33□□□□□ -1.4
USP39-219ENST00000496047 PPP5CP53041 499 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 EMP2P54851 167 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 MRPL28Q13084 256 aaKnown RBP6.33□□□□□ -1.4
USP39-219ENST00000496047 SKP2Q13309 424 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 ITGADQ13349 1161 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 TPBGQ13641 420 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 IL10RAQ13651 578 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 GALEQ14376 348 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 IL11RAQ14626 422 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 MFSD13AQ14CX5 517 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 PON3Q15166 354 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 SHBQ15464 509 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 SSX1Q16384 188 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 TRIM61Q5EBN2 209 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 VWA2Q5GFL6 755 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 EMC4Q5J8M3 183 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 PERM1Q5SV97 790 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms