RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	TCRBV5S2	A0A599	114 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	CPSF4L	A6NMK7	179 aa	Known RBP	10.64	□□□□□ -0.71
APTX-233	ENST00000496030	GJE1	A6NN92	205 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	C19orf84	I3L1E1	186 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	DNAJC8	O75937	253 aa	Predicted RBP	10.64	□□□□□ -0.71
APTX-233	ENST00000496030	ATP5H	O75947	161 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	AQP8	O94778	261 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	PRSS23	O95084	383 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	IMPDH2	P12268	514 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	CXCR1	P25024	350 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	FKBP2	P26885	142 aa	Known RBP	10.64	□□□□□ -0.71
APTX-233	ENST00000496030	TIMP3	P35625	211 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	EIF1AX	P47813	144 aa	Known RBP	10.64	□□□□□ -0.71
APTX-233	ENST00000496030	MYBPH	Q13203	477 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	PIN1	Q13526	163 aa	Predicted RBP	10.64	□□□□□ -0.71
APTX-233	ENST00000496030	SF3B4	Q15427	424 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
APTX-233	ENST00000496030	IFI44L	Q53G44	452 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	ALG10B	Q5I7T1	473 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	SWT1	Q5T5J6	900 aa	Known RBP	10.64	□□□□□ -0.71
APTX-233	ENST00000496030	RIPPLY2	Q5TAB7	128 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	TMEM211	Q6ICI0	200 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	LCN8	Q6JVE9	175 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	ASRGL1	Q7L266	308 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	MRGPRG	Q86SM5	289 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	FNDC9	Q8TBE3	224 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	ADAMTS16	Q8TE57	1224 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	LZIC	Q8WZA0	190 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	SLC47A1	Q96FL8	570 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	NSMCE2	Q96MF7	247 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	OR5B2	Q96R09	309 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	ZNF426	Q9BUY5	554 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	POTEKP	Q9BYX7	375 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	LRMDA	Q9H2I8	198 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	TMEM27	Q9HBJ8	222 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	CHST11	Q9NPF2	352 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030		Q9UFV3	132 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	RPS6KA6	Q9UK32	745 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	A4GNT	Q9UNA3	340 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	ZNF175	Q9Y473	711 aa		10.64	□□□□□ -0.71
APTX-233	ENST00000496030	TRAPPC13	A5PLN9	417 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	SLC22A20	A6NK97	555 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030		A8MVM7	634 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	ZNF814	B7Z6K7	855 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	FZD7	O75084	574 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	RCBTB2	O95199	551 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	TFPI	P10646	304 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	PNMT	P11086	282 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	ENPP1	P22413	925 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	SSTR2	P30874	369 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	DIO1	P49895	249 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	AGFG1	P52594	562 aa	Known RBP	10.63	□□□□□ -0.71
APTX-233	ENST00000496030	RAC3	P60763	192 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	RPS3A	P61247	264 aa	Known RBP	10.63	□□□□□ -0.71
APTX-233	ENST00000496030	H3F3A	P84243	136 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	TRAP1	Q12931	704 aa	Known RBP	10.63	□□□□□ -0.71
APTX-233	ENST00000496030	FOXF2	Q12947	444 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	PON3	Q15166	354 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	GUSBP1	Q15486	140 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	CYP2R1	Q6VVX0	501 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	DEF8	Q6ZN54	512 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	CCDC71	Q8IV32	467 aa	Predicted RBP	10.63	□□□□□ -0.71
APTX-233	ENST00000496030	LIX1L	Q8IVB5	337 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	P3H2	Q8IVL5	708 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	STK35	Q8TDR2	534 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	GEMIN6	Q8WXD5	167 aa	Known RBP	10.63	□□□□□ -0.71
APTX-233	ENST00000496030	ROBO4	Q8WZ75	1007 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	ASB9	Q96DX5	294 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	KTI12	Q96EK9	354 aa	Predicted RBP	10.63	□□□□□ -0.71
APTX-233	ENST00000496030	DNAJA3	Q96EY1	480 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	PYURF	Q96I23	114 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	PTDSS2	Q9BVG9	487 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	MUC13	Q9H3R2	512 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	RNF122	Q9H9V4	155 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	MAN2C1	Q9NTJ4	1040 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	NDUFAF4	Q9P032	175 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	RPS6KB2	Q9UBS0	482 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	RIMS3	Q9UJD0	308 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	ING1	Q9UK53	422 aa	Predicted RBP	10.63	□□□□□ -0.71
APTX-233	ENST00000496030	SAMD4A	Q9UPU9	718 aa	Known RBP	10.63	□□□□□ -0.71
APTX-233	ENST00000496030	RNF6	Q9Y252	685 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	TRAPPC4	Q9Y296	219 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	HDGFL3	Q9Y3E1	203 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	SPIN1	Q9Y657	262 aa	Predicted RBP	10.63	□□□□□ -0.71
APTX-233	ENST00000496030	ENPP4	Q9Y6X5	453 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	ALPK2	Q86TB3	2170 aa		10.63	□□□□□ -0.71
APTX-233	ENST00000496030	PRRC2A	P48634	2157 aa	Known RBP	10.62	□□□□□ -0.71
APTX-233	ENST00000496030	LIPT2	A6NK58	231 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	ELOA3D	A6NLF2	546 aa	Predicted RBP	10.62	□□□□□ -0.71
APTX-233	ENST00000496030	FTCDNL1	E5RQL4	147 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030		J3KTA2	159 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	SULT2B1	O00204	365 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	EBAG9	O00559	213 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	SMAD9	O15198	467 aa	Known RBP	10.62	□□□□□ -0.71
APTX-233	ENST00000496030	CHP2	O43745	196 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	GMNN	O75496	209 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	OR5F1	O95221	314 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	PMS2P2	O95744	297 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	IFNW1	P05000	195 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	SLC7A1	P30825	629 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	YAP1	P46937	504 aa	Known RBP	10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms