RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 AMDHD2Q9Y303 409 aa19.37■□□□□ 0.69
HDDC3-203ENST00000494993 MALRD1Q5VYJ5 2156 aa19.37■□□□□ 0.69
HDDC3-203ENST00000494993 ELOA3DA6NLF2 546 aaPredicted RBP19.36■□□□□ 0.69
HDDC3-203ENST00000494993 H7C417 338 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 FAAHO00519 579 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 TM9SF1O15321 606 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 RPS4Y1P22090 263 aaKnown RBP19.36■□□□□ 0.69
HDDC3-203ENST00000494993 SLC1A3P43003 542 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 ANXA11P50995 505 aaKnown RBP19.36■□□□□ 0.69
HDDC3-203ENST00000494993 MAP2K6P52564 334 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 TXNL4AP83876 142 aaKnown RBP19.36■□□□□ 0.69
HDDC3-203ENST00000494993 SLC25A3Q00325 362 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 TMEM249Q2WGJ8 235 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 ELOA3BQ3SY89 546 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 C6orf52Q5T4I8 152 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 TSPO2Q5TGU0 170 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 OGFOD2Q6N063 350 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 LRRC74BQ6ZQY2 392 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 TRIML2Q8N7C3 387 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 ELOA3Q8NG57 546 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 TEX37Q96LM6 180 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 TNFRSF13CQ96RJ3 184 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 MEAF6Q9HAF1 191 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 ATP23Q9Y6H3 246 aa19.36■□□□□ 0.69
HDDC3-203ENST00000494993 ZC3H12DA2A288 527 aaKnown RBP19.35■□□□□ 0.69
HDDC3-203ENST00000494993 CCDC154A6NI56 674 aa19.35■□□□□ 0.69
HDDC3-203ENST00000494993 RNF212BA8MTL3 300 aa19.35■□□□□ 0.69
HDDC3-203ENST00000494993 RGS16O15492 202 aaPredicted RBP19.35■□□□□ 0.69
HDDC3-203ENST00000494993 ALDOCP09972 364 aaKnown RBP19.35■□□□□ 0.69
HDDC3-203ENST00000494993 BGNP21810 368 aa19.35■□□□□ 0.69
HDDC3-203ENST00000494993 NME5P56597 212 aa19.35■□□□□ 0.69
HDDC3-203ENST00000494993 UFM1P61960 85 aa19.35■□□□□ 0.69
HDDC3-203ENST00000494993 TGFBR3Q03167 851 aa19.35■□□□□ 0.69
HDDC3-203ENST00000494993 LOXL1Q08397 574 aaPredicted RBP19.35■□□□□ 0.69
HDDC3-203ENST00000494993 EPS8Q12929 822 aa19.35■□□□□ 0.69
HDDC3-203ENST00000494993 MRPL2Q5T653 305 aaKnown RBP19.35■□□□□ 0.69
HDDC3-203ENST00000494993 PAQR6Q6TCH4 344 aa19.35■□□□□ 0.69
HDDC3-203ENST00000494993 ZNF525Q8N782 197 aa19.35■□□□□ 0.69
HDDC3-203ENST00000494993 PANX1Q96RD7 426 aa19.35■□□□□ 0.69
HDDC3-203ENST00000494993 MTHFD2LQ9H903 347 aaPredicted RBP19.35■□□□□ 0.69
HDDC3-203ENST00000494993 FKRPQ9H9S5 495 aa19.35■□□□□ 0.69
HDDC3-203ENST00000494993 CFAP73A6NFT4 308 aa19.34■□□□□ 0.69
HDDC3-203ENST00000494993 UQCRBP14927 111 aa19.34■□□□□ 0.69
HDDC3-203ENST00000494993 SLC25A16P16260 332 aa19.34■□□□□ 0.69
HDDC3-203ENST00000494993 IL7RP16871 459 aa19.34■□□□□ 0.69
HDDC3-203ENST00000494993 CDKN2CP42773 168 aa19.34■□□□□ 0.69
HDDC3-203ENST00000494993 GNA13Q14344 377 aa19.34■□□□□ 0.69
HDDC3-203ENST00000494993 C1QTNF12Q5T7M4 302 aa19.34■□□□□ 0.69
HDDC3-203ENST00000494993 WDR93Q6P2C0 686 aa19.34■□□□□ 0.69
HDDC3-203ENST00000494993 MREGQ8N565 214 aa19.34■□□□□ 0.69
HDDC3-203ENST00000494993 FAM168AQ92567 244 aa19.34■□□□□ 0.69
HDDC3-203ENST00000494993 TMEM45BQ96B21 275 aa19.34■□□□□ 0.69
HDDC3-203ENST00000494993 PNPOQ9NVS9 261 aa19.34■□□□□ 0.69
HDDC3-203ENST00000494993 AIG1Q9NVV5 245 aa19.34■□□□□ 0.69
HDDC3-203ENST00000494993 PGRP06401 933 aa19.33■□□□□ 0.68
HDDC3-203ENST00000494993 DBIP07108 87 aaKnown RBP19.33■□□□□ 0.68
HDDC3-203ENST00000494993 NR2F1P10589 423 aa19.33■□□□□ 0.68
HDDC3-203ENST00000494993 MPGP29372 298 aa19.33■□□□□ 0.68
HDDC3-203ENST00000494993 IL12AP29459 219 aa19.33■□□□□ 0.68
HDDC3-203ENST00000494993 VLDLRP98155 873 aa19.33■□□□□ 0.68
HDDC3-203ENST00000494993 STX3Q13277 289 aa19.33■□□□□ 0.68
HDDC3-203ENST00000494993 COX20Q5RI15 118 aa19.33■□□□□ 0.68
HDDC3-203ENST00000494993 OTUD3Q5T2D3 398 aaPredicted RBP19.33■□□□□ 0.68
HDDC3-203ENST00000494993 ZNF621Q6ZSS3 439 aa19.33■□□□□ 0.68
HDDC3-203ENST00000494993 OR52E6Q96RD3 313 aa19.33■□□□□ 0.68
HDDC3-203ENST00000494993 ADAM19Q9H013 955 aa19.33■□□□□ 0.68
HDDC3-203ENST00000494993 MANSC1Q9H8J5 431 aa19.33■□□□□ 0.68
HDDC3-203ENST00000494993 SDHDO14521 159 aa19.32■□□□□ 0.68
HDDC3-203ENST00000494993 GSNP06396 782 aa19.32■□□□□ 0.68
HDDC3-203ENST00000494993 BMP4P12644 408 aa19.32■□□□□ 0.68
HDDC3-203ENST00000494993 APOBEC3AP31941 199 aaPredicted RBP19.32■□□□□ 0.68
HDDC3-203ENST00000494993 EFNA4P52798 201 aa19.32■□□□□ 0.68
HDDC3-203ENST00000494993 CHRNB3Q05901 458 aa19.32■□□□□ 0.68
HDDC3-203ENST00000494993 LRRC74AQ0VAA2 488 aa19.32■□□□□ 0.68
HDDC3-203ENST00000494993 CEACAM7Q14002 265 aa19.32■□□□□ 0.68
HDDC3-203ENST00000494993 PHC2Q8IXK0 858 aa19.32■□□□□ 0.68
HDDC3-203ENST00000494993 ZNF440Q8IYI8 595 aa19.32■□□□□ 0.68
HDDC3-203ENST00000494993 TMEM99Q8N816 258 aa19.32■□□□□ 0.68
HDDC3-203ENST00000494993 OR9K2Q8NGE7 335 aa19.32■□□□□ 0.68
HDDC3-203ENST00000494993 PNPT1Q8TCS8 783 aaKnown RBP19.32■□□□□ 0.68
HDDC3-203ENST00000494993 C10orf105Q8TEF2 133 aa19.32■□□□□ 0.68
HDDC3-203ENST00000494993 SF3B5Q9BWJ5 86 aaKnown RBP19.32■□□□□ 0.68
HDDC3-203ENST00000494993 CDC42EP3Q9UKI2 254 aa19.32■□□□□ 0.68
HDDC3-203ENST00000494993 LIPT2A6NK58 231 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 ATP6V1G2-DDX39BF2Z307 99 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 AKR7A3O95154 331 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 WNT11O96014 354 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 GPIP06744 558 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 CSF3P09919 207 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 FAM157CP0CG43 387 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 PRPS1P60891 318 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 MPP2Q14168 576 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 OR7A5Q15622 319 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 GSTA3Q16772 222 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 KLHL24Q6TFL4 600 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 AAED1Q7RTV5 226 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 SPATA19Q7Z5L4 167 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 PEX5LQ8IYB4 626 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 ZIC4Q8N9L1 334 aa19.31■□□□□ 0.68
HDDC3-203ENST00000494993 POMGNT2Q8NAT1 580 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms