RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 VEZF1Q14119 521 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 SLC17A1Q14916 467 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 GABRA6Q16445 453 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 CLEC12BQ2HXU8 276 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 TSPO2Q5TGU0 170 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 C11orf71Q6IPW1 123 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 DTX2Q86UW9 622 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 UBE2J2Q8N2K1 259 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 CLIP4Q8N3C7 705 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 TRIML2Q8N7C3 387 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 TMEM99Q8N816 258 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 ZIC4Q8N9L1 334 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 OR52P1PQ8NH57 321 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 SLC38A5Q8WUX1 472 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 HTRA1Q92743 480 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 ARL8AQ96BM9 186 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 ZNF385AQ96PM9 386 aaKnown RBP10.23□□□□□ -0.77
VTI1A-208ENST00000494728 ADAM19Q9H013 955 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 TMBIM4Q9HC24 238 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 NGBQ9NPG2 151 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 SDR39U1Q9NRG7 319 aaPredicted RBP10.23□□□□□ -0.77
VTI1A-208ENST00000494728 SLC7A10Q9NS82 523 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 ASB6Q9NWX5 421 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 CISD1Q9NZ45 108 aaKnown RBP10.23□□□□□ -0.77
VTI1A-208ENST00000494728 TRAPPC4Q9Y296 219 aa10.23□□□□□ -0.77
VTI1A-208ENST00000494728 ZNF443Q9Y2A4 671 aaPredicted RBP10.23□□□□□ -0.77
VTI1A-208ENST00000494728 LIPT2A6NK58 231 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 FAM171A2A8MVW0 826 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 ZNF208O43345 1280 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 TMCC2O75069 709 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 SLC22A3O75751 556 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 AKR7A3O95154 331 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 DBIP07108 87 aaKnown RBP10.22□□□□□ -0.77
VTI1A-208ENST00000494728 TFPTP0C1Z6 253 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 IL7RP16871 459 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 CLK1P49759 484 aaKnown RBP10.22□□□□□ -0.77
VTI1A-208ENST00000494728 SLC18A1P54219 525 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 DSTNP60981 165 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 CEACAM7Q14002 265 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 SLC2A7Q6PXP3 512 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 PAQR6Q6TCH4 344 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 SERPINA11Q86U17 422 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 MSRB3Q8IXL7 192 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 WDR31Q8NA23 367 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 GLB1L3Q8NCI6 653 aaPredicted RBP10.22□□□□□ -0.77
VTI1A-208ENST00000494728 MAL2Q969L2 176 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 GTPBP3Q969Y2 492 aaKnown RBP10.22□□□□□ -0.77
VTI1A-208ENST00000494728 ZHX1-C8orf76Q96EF9 292 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 TMEM19Q96HH6 336 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 C1QTNF6Q9BXI9 259 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 AMBRA1Q9C0C7 1298 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 PAIP1Q9H074 479 aaKnown RBP10.22□□□□□ -0.77
VTI1A-208ENST00000494728 MANSC1Q9H8J5 431 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 MTHFD2LQ9H903 347 aaPredicted RBP10.22□□□□□ -0.77
VTI1A-208ENST00000494728 TPT1P8Q9HAU6 139 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 TAS2R16Q9NYV7 291 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 ZIM2Q9NZV7 527 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 P2RX2Q9UBL9 471 aa10.22□□□□□ -0.77
VTI1A-208ENST00000494728 A0A096LNT2 108 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 CCT8L1PA6NM43 557 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 TMEM229AB2RXF0 380 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 M0R1B8 84 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 GPR171O14626 319 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 MRPL33O75394 65 aaKnown RBP10.21□□□□□ -0.77
VTI1A-208ENST00000494728 KRT75O95678 551 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 IL6P05231 212 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 ZCCHC18P0CG32 403 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 CD40P25942 277 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 IDUAP35475 653 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 CRATP43155 626 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 MAGEA8P43361 318 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 HTR3AP46098 478 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 POLR2JP52435 117 aaKnown RBP10.21□□□□□ -0.77
VTI1A-208ENST00000494728 SLC35A1P78382 337 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 IRX1P78414 480 aaPredicted RBP10.21□□□□□ -0.77
VTI1A-208ENST00000494728 HOXC5Q00444 222 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 LRRC74AQ0VAA2 488 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 OR7A5Q15622 319 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 LIN52Q52LA3 116 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 BEND6Q5SZJ8 279 aaPredicted RBP10.21□□□□□ -0.77
VTI1A-208ENST00000494728 OTUD3Q5T2D3 398 aaPredicted RBP10.21□□□□□ -0.77
VTI1A-208ENST00000494728 RNF220Q5VTB9 566 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 LINGO2Q7L985 606 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 PEX5LQ8IYB4 626 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 CADM2Q8N3J6 435 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 OR9K2Q8NGE7 335 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 GTF2H4Q92759 462 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 C3orf49Q96BT1 292 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 DDIT4LQ96D03 193 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 MUCL1Q96DR8 90 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 MUS81Q96NY9 551 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 ZBTB18Q99592 522 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 MDFIQ99750 246 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 USB1Q9BQ65 265 aaKnown RBP10.21□□□□□ -0.77
VTI1A-208ENST00000494728 SLCO1B3Q9NPD5 702 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 SLC25A37Q9NYZ2 338 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 SLAMF8Q9P0V8 285 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 SEC14L4Q9UDX3 406 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 B3GALT5Q9Y2C3 310 aa10.21□□□□□ -0.77
VTI1A-208ENST00000494728 SLC9A8Q9Y2E8 581 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms