RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ABCE1P61221 599 aaKnown RBP11.06□□□□□ -0.64
SKA1-205ENST00000494518 SLC35A1P78382 337 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 LGALS3BPQ08380 585 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 GGTLC2Q14390 218 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 CASP8Q14790 479 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 CARTPTQ16568 116 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 ELOA3BQ3SY89 546 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 FAM174BQ3ZCQ3 159 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 HIKESHIQ53FT3 197 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 OTUD3Q5T2D3 398 aaPredicted RBP11.06□□□□□ -0.64
SKA1-205ENST00000494518 ANXA8L1Q5VT79 327 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 OR7E24Q6IFN5 339 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 ZNF544Q6NX49 715 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 TMEM99Q8N816 258 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 ELOA3Q8NG57 546 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 WDR60Q8WVS4 1066 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 DDIT4LQ96D03 193 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 TEX37Q96LM6 180 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 NAA11Q9BSU3 229 aaPredicted RBP11.06□□□□□ -0.64
SKA1-205ENST00000494518 NUF2Q9BZD4 464 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 SLC38A1Q9H2H9 487 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 FKRPQ9H9S5 495 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 EXOSC3Q9NQT5 275 aaKnown RBP11.06□□□□□ -0.64
SKA1-205ENST00000494518 POLE3Q9NRF9 147 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 CDC42EP3Q9UKI2 254 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 MOKQ9UQ07 419 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 SLC9A8Q9Y2E8 581 aa11.06□□□□□ -0.64
SKA1-205ENST00000494518 E9PBE3 544 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 DNPH1O43598 174 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 AKR7A3O95154 331 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 SERPINE1P05121 402 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 GKN3PP0CG01 181 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 S100A3P33764 101 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 CDKN2CP42773 168 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 EFNA4P52798 201 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 UFM1P61960 85 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 TUBA1BP68363 451 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 TUBA4AP68366 448 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 H3F3AP84243 136 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 BNIP2Q12982 314 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 CEACAM7Q14002 265 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 SLC17A1Q14916 467 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 OR7A5Q15622 319 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 KRTAP24-1Q3LI83 254 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 COX20Q5RI15 118 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 MRPL2Q5T653 305 aaKnown RBP11.05□□□□□ -0.64
SKA1-205ENST00000494518 CYB5R2Q6BCY4 276 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 KLHL24Q6TFL4 600 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 TUBA1AQ71U36 451 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 GPAT4Q86UL3 456 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 VPS37AQ8NEZ2 397 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 ZNF385AQ96PM9 386 aaKnown RBP11.05□□□□□ -0.64
SKA1-205ENST00000494518 SORCS2Q96PQ0 1159 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 SORT1Q99523 831 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 AMBRA1Q9C0C7 1298 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 DCTN4Q9UJW0 460 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 TRAPPC4Q9Y296 219 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 AMDHD2Q9Y303 409 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 PMF1-BGLAPU3KQ54 211 aa11.05□□□□□ -0.64
SKA1-205ENST00000494518 SLC35F4A4IF30 521 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 CCDC154A6NI56 674 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 AGAP5A6NIR3 686 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 EIF1BO60739 113 aaKnown RBP11.04□□□□□ -0.64
SKA1-205ENST00000494518 LGI1O95970 557 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 ALDOCP09972 364 aaKnown RBP11.04□□□□□ -0.64
SKA1-205ENST00000494518 MYZAPP0CAP1 466 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 LBPP18428 481 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 BGNP21810 368 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 USF1P22415 310 aaPredicted RBP11.04□□□□□ -0.64
SKA1-205ENST00000494518 IGFBP5P24593 272 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 APOBEC3AP31941 199 aaPredicted RBP11.04□□□□□ -0.64
SKA1-205ENST00000494518 SLC1A3P43003 542 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 HTR3AP46098 478 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 SLC1A6P48664 564 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 CLK1P49759 484 aaKnown RBP11.04□□□□□ -0.64
SKA1-205ENST00000494518 CHRNB3Q05901 458 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 EPS8Q12929 822 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 SMU1Q2TAY7 513 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 VHLLQ6RSH7 139 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 AAED1Q7RTV5 226 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 CADM2Q8N3J6 435 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 ANKS4BQ8N8V4 417 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 ZIC4Q8N9L1 334 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 OR9K2Q8NGE7 335 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 TESCQ96BS2 214 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 AURKBQ96GD4 344 aaPredicted RBP11.04□□□□□ -0.64
SKA1-205ENST00000494518 ALKBH3Q96Q83 286 aaPredicted RBP11.04□□□□□ -0.64
SKA1-205ENST00000494518 PANX1Q96RD7 426 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 ROPN1BQ9BZX4 212 aaPredicted RBP11.04□□□□□ -0.64
SKA1-205ENST00000494518 SHARPINQ9H0F6 387 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 ROPN1Q9HAT0 212 aaPredicted RBP11.04□□□□□ -0.64
SKA1-205ENST00000494518 PNPOQ9NVS9 261 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 RLIMQ9NVW2 624 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 PARPBPQ9NWS1 579 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 ADPRHL2Q9NX46 363 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 RAP2CQ9Y3L5 183 aa11.04□□□□□ -0.64
SKA1-205ENST00000494518 IGHV1-18A0A0C4DH31 117 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 CFAP73A6NFT4 308 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 LIPT2A6NK58 231 aa11.03□□□□□ -0.64
SKA1-205ENST00000494518 NR5A2O00482 541 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms