RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PPP4R4Q6NUP7 873 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 C3orf33Q6P1S2 294 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 ZNF474Q6S9Z5 364 aaPredicted RBP11.79□□□□□ -0.52
ERCC3-209ENST00000494464 OLIG3Q7RTU3 272 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 RNF130Q86XS8 419 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 PTOV1Q86YD1 416 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 RNF128Q8TEB7 428 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 TRNT1Q96Q11 434 aaKnown RBP11.79□□□□□ -0.52
ERCC3-209ENST00000494464 C9orf16Q9BUW7 83 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 CHID1Q9BWS9 393 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 OPN3Q9H1Y3 402 aaPredicted RBP11.79□□□□□ -0.52
ERCC3-209ENST00000494464 COQ10BQ9H8M1 238 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 ELOVL5Q9NYP7 299 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 NDRG3Q9UGV2 375 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 PROCRQ9UNN8 238 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 SAMD4AQ9UPU9 718 aaKnown RBP11.79□□□□□ -0.52
ERCC3-209ENST00000494464 LIPT1Q9Y234 373 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 PRAMEF27A3QJZ7 478 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 DENRO43583 198 aaKnown RBP11.79□□□□□ -0.52
ERCC3-209ENST00000494464 DEAF1O75398 565 aaPredicted RBP11.79□□□□□ -0.52
ERCC3-209ENST00000494464 H6PDO95479 791 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 KRT75O95678 551 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 PLGP00747 810 aaPredicted RBP11.79□□□□□ -0.52
ERCC3-209ENST00000494464 C1QCP02747 245 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 PABPC4LP0CB38 370 aaKnown RBP11.79□□□□□ -0.52
ERCC3-209ENST00000494464 UBTFL6P0CB48 400 aaPredicted RBP11.79□□□□□ -0.52
ERCC3-209ENST00000494464 PGCP20142 388 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 MVDP53602 400 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 GPAT3Q53EU6 434 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 SPNS3Q6ZMD2 512 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 AMIGO2Q86SJ2 522 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 CDC20BQ86Y33 519 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 TMEM234Q8WY98 164 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 ZNF524Q96C55 264 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 SLC47A1Q96FL8 570 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 BDH2Q9BUT1 245 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 SEMA6AQ9H2E6 1030 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 SLC38A1Q9H2H9 487 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 GP6Q9HCN6 339 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 TIGARQ9NQ88 270 aa11.79□□□□□ -0.52
ERCC3-209ENST00000494464 EXOSC3Q9NQT5 275 aaKnown RBP11.79□□□□□ -0.52
ERCC3-209ENST00000494464 CCDC168Q8NDH2 2452 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 CELSR1Q9NYQ6 3014 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 CLOCKO15516 846 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 TPST1O60507 370 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 SERPINA1P01009 418 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 OPN1LWP04000 364 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 POU2F1P14859 743 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 RPS4Y1P22090 263 aaKnown RBP11.78□□□□□ -0.52
ERCC3-209ENST00000494464 AGTR1P30556 359 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 UGT2B10P36537 528 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 MAGEA2P43356 314 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 CTBP2P56545 445 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 CARD18P57730 90 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 PLAURQ03405 335 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 CHRNEQ04844 493 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 FAM27E3Q08E93 113 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 MED21Q13503 144 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 RNPS1Q15287 305 aaKnown RBP11.78□□□□□ -0.52
ERCC3-209ENST00000494464 ADRM1Q16186 407 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 GTF2IRD2BQ6EKJ0 949 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 GTF2IRD2Q86UP8 949 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 EPHX4Q8IUS5 362 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 SLC30A8Q8IWU4 369 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 CMIPQ8IY22 773 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 ZNF610Q8N9Z0 462 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 NRGNQ92686 78 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 PMM1Q92871 262 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 OSTF1Q92882 214 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 SEPHS2Q99611 448 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 SRXN1Q9BYN0 137 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 TMEM38AQ9H6F2 299 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 BATF3Q9NR55 127 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 PLSCR4Q9NRQ2 329 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.78□□□□□ -0.52
ERCC3-209ENST00000494464 ACER3Q9NUN7 267 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 ST6GALNAC2Q9UJ37 374 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 RPS6KA6Q9UK32 745 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 ITGB1BP2Q9UKP3 347 aa11.78□□□□□ -0.52
ERCC3-209ENST00000494464 MPDZO75970 2070 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 AGAP5A6NIR3 686 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 CYP7B1O75881 506 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 PRKD3O94806 890 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 HRGP04196 525 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 CHRM4P08173 479 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 KDELR2P33947 212 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 KCNJ10P78508 379 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 SYPL1Q16563 259 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 TMEM176BQ3YBM2 270 aaPredicted RBP11.77□□□□□ -0.53
ERCC3-209ENST00000494464 COX20Q5RI15 118 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 GCNT6Q5T4J0 391 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 PAMR1Q6UXH9 720 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 ZBTB49Q6ZSB9 765 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 CBLL1Q75N03 491 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 FAM86B1Q8N7N1 296 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 C11orf65Q8NCR3 313 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 PNPT1Q8TCS8 783 aaKnown RBP11.77□□□□□ -0.53
ERCC3-209ENST00000494464 SLC25A43Q8WUT9 341 aaPredicted RBP11.77□□□□□ -0.53
ERCC3-209ENST00000494464 ZG16BQ96DA0 208 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 PYURFQ96I23 114 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms