RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 UBOX5O94941 541 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 PLGP00747 810 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-208ENST00000494334 CGAP01215 116 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 FPR1P21462 350 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 IDUAP35475 653 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 MSX2P35548 267 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-208ENST00000494334 SLC35A1P78382 337 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 H3F3AP84243 136 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 CEACAM7Q14002 265 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 RNPS1Q15287 305 aaKnown RBP12.08□□□□□ -0.48
COL1A1-208ENST00000494334 C1orf140Q5VVS0 124 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 BTLAQ7Z6A9 289 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 VTCN1Q7Z7D3 282 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 TUSC5Q8IXB3 177 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 SLC43A2Q8N370 569 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 RNF217Q8TC41 542 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 LZICQ8WZA0 190 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 FAM162AQ96A26 154 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 PSD2Q9BQI7 771 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 PIGMQ9H3S5 423 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 NPDC1Q9NQX5 325 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-208ENST00000494334 ADPRHL2Q9NX46 363 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 TAS2R1Q9NYW7 299 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 SELENONQ9NZV5 590 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 ING1Q9UK53 422 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-208ENST00000494334 MED12LQ86YW9 2145 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 LIPT2A6NK58 231 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 A8MXE2 369 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 ZNF814B7Z6K7 855 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 EEF1E1-BLOC1S5C9J1V9 151 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 EEF1E1O43324 174 aaKnown RBP12.07□□□□□ -0.48
COL1A1-208ENST00000494334 CHP2O43745 196 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 EIF1BO60739 113 aaKnown RBP12.07□□□□□ -0.48
COL1A1-208ENST00000494334 RAMP1O60894 148 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 LYPD3O95274 346 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 ZNF682O95780 498 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 GPIP06744 558 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 ASCL1P50553 236 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 RASGEF1BQ0VAM2 473 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 SPTAN1Q13813 2472 aaKnown RBP12.07□□□□□ -0.48
COL1A1-208ENST00000494334 OR7A5Q15622 319 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 FBXL19-AS1Q494R0 122 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 SPATS1Q496A3 300 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 SWT1Q5T5J6 900 aaKnown RBP12.07□□□□□ -0.48
COL1A1-208ENST00000494334 LINC00114Q6XXX2 140 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 DEF8Q6ZN54 512 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 LUZP2Q86TE4 346 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 CCDC103Q8IW40 242 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 OR6K3Q8NGY3 331 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 ZHX1-C8orf76Q96EF9 292 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 KTI12Q96EK9 354 aaPredicted RBP12.07□□□□□ -0.48
COL1A1-208ENST00000494334 PTDSS2Q9BVG9 487 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 TAPBPLQ9BX59 468 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 C1orf21Q9H246 121 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 GORASP2Q9H8Y8 452 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 BCO1Q9HAY6 547 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 GP6Q9HCN6 339 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 KLHL9Q9P2J3 617 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 EMC9Q9Y3B6 208 aa12.07□□□□□ -0.48
COL1A1-208ENST00000494334 TRAPPC13A5PLN9 417 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 FTCDNL1E5RQL4 147 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 MSTNO14793 375 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 GMNNO75496 209 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 SMNDC1O75940 238 aaKnown RBP eCLIP12.06□□□□□ -0.48
COL1A1-208ENST00000494334 AHSA1O95433 338 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 YES1P07947 543 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 CD8BP10966 210 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 AGTR1P30556 359 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 RPS5P46782 204 aaKnown RBP12.06□□□□□ -0.48
COL1A1-208ENST00000494334 CTBP2P56545 445 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 PIN1Q13526 163 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-208ENST00000494334 PDK3Q15120 406 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 IFI44LQ53G44 452 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 TMEM201Q5SNT2 666 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 ABLIM2Q6H8Q1 611 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 PAQR6Q6TCH4 344 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 WDR88Q6ZMY6 472 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 FKBP9P1Q75LS8 142 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 NUFIP2Q7Z417 695 aaKnown RBP12.06□□□□□ -0.48
COL1A1-208ENST00000494334 P3H2Q8IVL5 708 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 TMEM99Q8N816 258 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 ZNF610Q8N9Z0 462 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 ACBD4Q8NC06 268 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 MFSD8Q8NHS3 518 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 RNASE6Q93091 150 aaKnown RBP12.06□□□□□ -0.48
COL1A1-208ENST00000494334 TAAR8Q969N4 342 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 ZNF775Q96BV0 537 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-208ENST00000494334 SLC41A3Q96GZ6 507 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 HSH2DQ96JZ2 352 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 ZNF300Q96RE9 604 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-208ENST00000494334 NAA11Q9BSU3 229 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-208ENST00000494334 AMBRA1Q9C0C7 1298 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 ENKD1Q9H0I2 346 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 OPN3Q9H1Y3 402 aaPredicted RBP12.06□□□□□ -0.48
COL1A1-208ENST00000494334 PLSCR4Q9NRQ2 329 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 DCAF13Q9NV06 445 aaKnown RBP12.06□□□□□ -0.48
COL1A1-208ENST00000494334 KLHL13Q9P2N7 655 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 MAGEL2Q9UJ55 1249 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 RPS6KA6Q9UK32 745 aa12.06□□□□□ -0.48
COL1A1-208ENST00000494334 SLC7A7Q9UM01 511 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms