RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 GADD45GO95257 159 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 PMS2P2O95744 297 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 STSP08842 583 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 OR2B6P58173 313 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 PON3Q15166 354 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 OR7A5Q15622 319 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 RPTNQ6XPR3 784 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 B3GNT6Q6ZMB0 384 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 ZNF771Q7L3S4 317 aaPredicted RBP13.06□□□□□ -0.32
BRCA1-223ENST00000494123 RRM2BQ7LG56 351 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 P4HA3Q7Z4N8 544 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 C10orf67Q8IYJ2 551 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 C10orf53Q8N6V4 93 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 OR52J3Q8NH60 311 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 CPNE4Q96A23 557 aaPredicted RBP13.06□□□□□ -0.32
BRCA1-223ENST00000494123 SLC25A36Q96CQ1 311 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 KTI12Q96EK9 354 aaPredicted RBP13.06□□□□□ -0.32
BRCA1-223ENST00000494123 SLC19A3Q9BZV2 496 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 KLHL4Q9C0H6 718 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 DENND2DQ9H6A0 471 aaPredicted RBP13.06□□□□□ -0.32
BRCA1-223ENST00000494123 MAN2C1Q9NTJ4 1040 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 TRAPPC4Q9Y296 219 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 MED31Q9Y3C7 131 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 A0A1W2PRQ8 180 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 SLC22A20A6NK97 555 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 CCL21O00585 134 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 GNGT2O14610 69 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 NPIPB7O75200 414 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 CST1P01037 141 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 IMPDH2P12268 514 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 UGT2B15P54855 530 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 RAC3P60763 192 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 SLC35A1P78382 337 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 DGCR6Q14129 220 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 FAM69AQ5T7M9 428 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 OR2T5Q6IEZ7 315 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 ZNF730Q6ZMV8 503 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 OR2T29Q8NH02 315 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 ACOT11Q8WXI4 607 aaPredicted RBP13.06□□□□□ -0.32
BRCA1-223ENST00000494123 ZNF426Q9BUY5 554 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 SRXN1Q9BYN0 137 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 C6orf203Q9P0P8 240 aaPredicted RBP13.06□□□□□ -0.32
BRCA1-223ENST00000494123 FAM215AQ9Y5M1 114 aa13.06□□□□□ -0.32
BRCA1-223ENST00000494123 ESPL1Q14674 2120 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 A0A1B0GUH1 482 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 LIPT2A6NK58 231 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 PYCARD-AS1I3L0S3 204 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 DNPH1O43598 174 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 KRT36O76013 467 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 FCGR2AP12318 317 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 FPR1P21462 350 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 ENPP1P22413 925 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 ZNF239Q16600 458 aaKnown RBP13.05□□□□□ -0.32
BRCA1-223ENST00000494123 NSUN5P2Q63ZY6 315 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 RTL6Q6ICC9 239 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 PLXDC2Q6UX71 529 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 PAPD5Q8NDF8 572 aaKnown RBP13.05□□□□□ -0.32
BRCA1-223ENST00000494123 MFSD8Q8NHS3 518 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 SLC7A13Q8TCU3 470 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 TAAR8Q969N4 342 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 SLCO4A1Q96BD0 722 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 DHRS1Q96LJ7 313 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 REEP1Q9H902 201 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 CALHM2Q9HA72 323 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 TMCC3Q9ULS5 477 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 ZNF175Q9Y473 711 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 AP4S1Q9Y587 144 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 KIAA1549Q9HCM3 1950 aa13.05□□□□□ -0.32
BRCA1-223ENST00000494123 CD8B2A6NJW9 211 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 E9PLN8 166 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 TNFRSF11BO00300 401 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 EIF1BO60739 113 aaKnown RBP13.04□□□□□ -0.32
BRCA1-223ENST00000494123 FUT4P22083 530 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 MFSD13AQ14CX5 517 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 TMEM211Q6ICI0 200 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 PODNL1Q6PEZ8 512 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 ADGRE4PQ86SQ3 457 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 FJX1Q86VR8 437 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 NRMQ8IXM6 262 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 RPRMLQ8N4K4 120 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 PFN4Q8NHR9 129 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 FNDC9Q8TBE3 224 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 ROBO4Q8WZ75 1007 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 WNT2BQ93097 391 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 ALPK1Q96QP1 1244 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 TM9SF2Q99805 663 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 VKORC1Q9BQB6 163 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 NAA11Q9BSU3 229 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-223ENST00000494123 PTDSS2Q9BVG9 487 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 KRCC1Q9NPI7 259 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-223ENST00000494123 CLCF1Q9UBD9 225 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 MEMO1Q9Y316 297 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 POLEQ07864 2286 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 ARHGAP21Q5T5U3 1957 aa13.04□□□□□ -0.32
BRCA1-223ENST00000494123 A0A087WUU8 490 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 IGHV3-15A0A0B4J1V0 119 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 TRBV4-1A0A0J9YWV2 114 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 ENO4A6NNW6 628 aa13.03□□□□□ -0.32
BRCA1-223ENST00000494123 KDM4EB2RXH2 506 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-223ENST00000494123 LRRTM2O43300 516 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms